Aeromonas rivuli: KYK33_00665
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Entry
KYK33_00665 CDS
T07884
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ariv
Aeromonas rivuli
Pathway
ariv03420
Nucleotide excision repair
ariv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ariv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KYK33_00665 (uvrD)
03430 Mismatch repair
KYK33_00665 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ariv03400
]
KYK33_00665 (uvrD)
Enzymes [BR:
ariv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KYK33_00665 (uvrD)
DNA repair and recombination proteins [BR:
ariv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KYK33_00665 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KYK33_00665 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UBO74159
LinkDB
All DBs
Position
154875..157046
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSTLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMQVERCSPFSIIAV
TFTNKAAAEMRGRVEKVIGDGVRGMWIGTFHGIAHRLLRAHHLDAGLPQDFQILDSDDQY
RLIRRVLKALNLDEKHWAPRAVMGYINGKKDEGLRPGDIDLYGDPVTRTYQQIYKTYQET
CDRSGLVDFAELLLRAHELWLNRPHVLEHYRDRFQNILVDEFQDTNGIQYAWLRMLAGES
GRVMIVGDDDQSIYGWRGAKIENIQRFLTDYQGAETIRLEQNYRSTANILKAANSVIANN
SDRLGKELWTEGADGDPISLYAAFNEVDEARFVVGRLKDWKEKGGLLADCAILYRSNAQS
RVLEEALMQDAMPYRIYGGLRFFERQEIKDAMAYLRLINNRGDDASFERVVNTPTRGIGE
RTLEILRNNARDRGLNLWQSARTLLDEKVLTGRAGNAVRGFVELVDALEEQVSLLPLHQQ
ADIAIQHSGLKAMYLAEKGEKSQARVENLDELVTACRQYNRPDELEDMSDLSAFLAHAAL
ESGENQADEYSDAVQLMTLHSAKGLEYPLVLLVGVEEGMFPSQQSTEESGRLEEERRLCY
VGMTRAMEKLYICYAESRRIYGREMFHKPSRFIREMPAECLEEIRLRTQVSRPTQYGRFS
QNEVQQSFDASGIKLGQRVLHPKFGEGIVLNFEGVGQQSRVQIQFDEVGAKWLVTAYARL
EAL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcgaccctgctcgacgggctcaacgacaagcaaagagatgccgttgcggcg
ccccgtagcaatctgctggtgctggccggtgccggctcgggcaagacccgggtgctggtg
caccgtatcgcctggctgatgcaggtggagcgttgctcacccttctccatcatcgcggtg
acctttaccaacaaggcggcggccgagatgcgcggccgggtcgagaaggtgataggggac
ggggtgcgcggcatgtggataggcaccttccacggcatcgcccaccgcttgctgcgggcc
catcatctggatgcgggcctgccccaggacttccagatcctcgactcggacgaccagtac
cgcctcatccgccgggtgctcaaggcgctcaacctcgacgagaagcactgggccccccgc
gccgtgatgggctacatcaacggcaagaaggatgaggggttgcgccccggtgacatcgac
ctctacggcgaccccgtcacccgcacctatcagcagatctacaagacctatcaggagacc
tgcgatcgctccgggctggtggattttgccgaactgctgctgcgcgcccacgagctgtgg
ctcaaccggccccatgtgctggagcactaccgggatcgcttccagaacatactggtggac
gaattccaggataccaacggcatccagtacgcctggctgcgcatgctggcaggcgagtcc
ggccgggtgatgatagtgggtgacgacgatcagtccatctacggctggcgcggcgccaag
atagagaacatccagcgcttcctgaccgactatcagggcgccgagaccatacgcctcgag
cagaactaccgctccaccgccaatatcctgaaagccgccaacagcgtcatcgccaacaac
tcagacaggctcggcaaggagttgtggaccgagggggctgatggggatcctatctctctc
tacgccgccttcaacgaggtggacgaggcccgcttcgtggtgggtcgcctcaaggactgg
aaggagaagggcggcctgctcgccgattgcgccatcctctatcgctccaacgcccagtcc
cgggtgctggaagaggcgctgatgcaggacgccatgccgtaccgcatctatggcggcctg
cgcttcttcgagcgtcaggagatcaaggacgccatggcttacctgcgcctcatcaacaac
aggggcgacgacgccagcttcgagcgggtcgtcaacaccccgacccggggcatcggcgag
cgcaccctggagatattgcgcaacaacgcccgggatcgtggcctcaacctctggcaatcg
gcccgcaccctgctcgatgagaaggtgctgaccggtcgcgccggcaacgcggtgcgcggt
ttcgtcgagctggtggatgcgctggaggaacaggtctccctgctgcccctgcatcagcag
gcggacatcgccatccagcactccggcctcaaggccatgtatctggcggaaaaaggcgag
aaatcccaggcacgggtggagaacctggacgagctggtgaccgcctgccgtcagtacaat
cgcccggacgagctggaggatatgagcgatctctccgccttcctcgcccatgcggcgctg
gaatccggcgagaatcaggcggacgaatacagtgacgcggtgcaactgatgaccttgcac
agcgccaagggcctcgaatatccgctggtgctgctggttggtgtggaggagggcatgttc
cccagccagcaatccaccgaggagtcgggccggttggaggaggagcggcgcctctgttac
gtgggcatgacccgcgccatggagaagctctacatctgttatgcggagagccgccgcatc
tatggccgcgagatgttccacaagccgagccgctttatccgcgagatgcccgccgagtgt
ctggaagagatccggctgcgcacccaggtcagccgccccacccagtacggccgcttcagc
cagaacgaggtgcagcagagcttcgacgccagcggcatcaagctcggccagcgagtgctc
catccgaaatttggcgaaggcatagtgctcaacttcgaaggggtcggccagcagagtcgg
gtgcagatccagttcgacgaggtcggcgccaagtggctggtgacggcgtatgccaggttg
gaagcgctctag
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