Aeromonas rivuli: KYK33_03470
Help
Entry
KYK33_03470 CDS
T07884
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ariv
Aeromonas rivuli
Brite
KEGG Orthology (KO) [BR:
ariv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ariv03009
]
KYK33_03470 (srmB)
Enzymes [BR:
ariv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KYK33_03470 (srmB)
Ribosome biogenesis [BR:
ariv03009
]
Prokaryotic type
rRNA helicases
KYK33_03470 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UBO74657
LinkDB
All DBs
Position
complement(735572..736795)
Genome browser
AA seq
407 aa
AA seq
DB search
MSQSFDDFDLNPALNRALAEMGFTRPTTIQQMVLEPALEGRDILASAPTGTGKTAAFLLP
ALQHLLDFPRRKPGPCRMLILTPTRELALQITAHAKALAVHTHISVETIIGGVSHDEQLP
ALTKTTDIVVATPGRLLEYIEREEFEGHDIEILVLDEADRMLDMGFIKDVNRIVEEARYR
KHSMLFSATLEGAGLTKFANEILKDPVELHAEPPRSERRPITQWVHLADDANHKLALLIH
ILKDPETQKAIVFVRTRERLAELSGQLQAAGISCAWIRGEMEQSKRIESIRKFHAGEVPF
LIATDVAARGIDLPNVSHVINYDMPYGTDVYVHRIGRTGRAGNRGCAISLVEAHDMAIVA
KIERYTEERLKRRVIDDLRPKHKEARVPVKKKKPKDAKKKSAKKKKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatcctttgatgatttcgacctgaatcccgccctcaaccgggccctggccgag
atggggtttacccgcccaaccaccattcagcagatggtgctggaacccgcactggagggt
cgtgacatcctggcctcggcaccgactggcaccggcaaaacggccgccttcctgttgcct
gccctgcagcatctgctcgacttcccgcgccgcaagccgggcccctgccgcatgcttatc
ctgaccccaacccgcgagctggccttgcagatcaccgctcacgccaaggccctggccgtg
cacactcacatcagtgtcgagaccatcatcggtggcgtcagtcatgacgagcagctgcct
gccctgaccaagaccaccgacatcgtggtcgccaccccgggacgcctgctcgaatatatt
gagcgggaagagttcgaggggcacgacatcgagatactggtgctcgatgaagcggatcgc
atgctggacatgggcttcatcaaggatgtgaaccgcatcgtcgaagaggcccgctatcgc
aaacacagcatgctcttctccgccaccctggaaggggccggtctcaccaagtttgccaac
gagatcctcaaggatccggtcgagctgcatgccgagccgccgcgcagcgagcgccgtccc
atcacccagtgggtgcatctggccgatgacgccaaccacaagctggcgctgctgatccac
attctgaaagatcccgaaacccagaaggccatcgtcttcgtgcgcacccgtgagcgcctg
gccgaactctccggccagttgcaggcggctggcatctcctgtgcctggatccgtggtgag
atggagcagagcaagcgcatcgagtcgatccgcaagttccacgcgggggaagtccccttc
ctcatcgccaccgacgtcgccgcccgcggcatcgacctgcccaacgtcagccatgtcatc
aactacgacatgccctacggcaccgacgtctatgtccaccgcatcggccgtaccggccgc
gccggcaaccgtggttgcgccatcagcctggtggaagcccatgacatggccatcgtcgcc
aagattgaacgctacaccgaggagcgcctcaagcgccgggtgatcgacgacctgcgcccc
aagcacaaagaagcccgcgtgccggtgaagaagaaaaaacccaaggatgccaagaagaag
tcggcgaagaagaaaaagaagtaa
DBGET
integrated database retrieval system
