Aeromonas rivuli: KYK33_04105
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Entry
KYK33_04105 CDS
T07884
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ariv
Aeromonas rivuli
Pathway
ariv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ariv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KYK33_04105 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ariv03019
]
KYK33_04105 (pcnB)
Enzymes [BR:
ariv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KYK33_04105 (pcnB)
Messenger RNA biogenesis [BR:
ariv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KYK33_04105 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UBO74762
LinkDB
All DBs
Position
complement(844974..846452)
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AA seq
492 aa
AA seq
DB search
MKRCTIFSQIANFCRKVLGKEEGDESMTTQEPVHTATQRSAGPRRTLSRDQHPISRKEIS
ENALKVLYRLNKGGYDAYLVGGGVRDILLGRTPKDFDIATNATPEQIKALFSNCRLIGRR
FRLAHIVFGRDVIEVATFRGHHHQVNNSRHVSAQSDEGMLLRDNVYGTIEEDAERRDFTV
NALYYSAKDFTLHDFEGGIDDLAERKLELIGDPETRYREDPVRMLRAVRFAAKLDMHISP
RSAAPIKELASLLQDIPAARLFEETLKLFLAGDGLATYKLLREYGLFQQLFPQVATLFTP
HGNSPFEQFIEHALTDTDTRVREEKRVTPAFLYAALLWGSVEARARVLENESGLPWHDAF
MLAINEVLDAQVRIIAVPRRFTTDVRDIWALQQRLTRRQGRHPERAMEHPKFRAAFDFLL
LRNRVERGLGELAGWWERYVESNPDVRPQLQREATRGGDRPQADKPQGEGEKRSSNSRNR
RRPRRRKPKAAE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtgtaccattttttcccagatcgcaaacttttgccgcaaggtgctcggcaag
gaagaaggcgacgagtcgatgacgactcaagagcctgtccacactgccacccagcggagt
gccggaccaagacgcacgctgagccgtgaccagcaccccatctcgcgcaaagagatcagt
gagaatgccctcaaggttctctatcgcctgaacaagggcggctatgacgcctacctggtc
ggcgggggtgtccgggatattctgcttgggaggacgccaaaggatttcgacatcgccacc
aacgcgaccccggaacagatcaaggcgctgtttagcaactgccgcctgatcggccgccgc
ttccgtctggcccatatcgtcttcggacgcgacgtgatcgaggtcgccaccttccgtggc
catcaccatcaggtcaacaacagccgccatgtctccgcccagagcgatgaaggcatgctg
ctgcgcgacaacgtctacggcaccatcgaagaggatgccgagcgtcgcgacttcaccgtc
aacgccctctattacagtgccaaggatttcaccctgcacgacttcgagggcggcatcgat
gatctggccgagcgcaagctggagctgatcggcgaccccgagacccgctaccgggaagac
ccggtgcgcatgctgcgcgccgtgcgtttcgccgccaagctggatatgcacatcagtccg
cgcagtgccgcccccatcaaggagctggcatcgctgctgcaagatatcccggccgcccgg
ctgtttgaggagaccctcaagctgttcctggcaggcgacggcctggcgacctacaagctg
cttcgtgaatatggcctgttccagcagctgttcccccaggtcgccaccctgttcaccccg
cacggcaactcgccgttcgagcagttcatcgagcatgccctgactgacaccgacacccgg
gtgcgcgaagagaagcgggtcactcccgccttcctgtacgccgccctgctgtggggcagt
gtcgaggcccgtgcccgcgtgctggaaaacgagagcggcctgccctggcatgacgccttc
atgctggccatcaacgaggtgctcgacgcccaggtgcgcatcattgccgtgccccgtcgc
ttcaccacggatgtgcgcgacatctgggccctgcagcagcgcctgacccgccgtcagggc
cgccaccccgagcgcgccatggagcatcccaaattccgcgccgccttcgacttcctgttg
ctgcgcaaccgggttgagcgtggcctgggcgagctcgccggctggtgggagcgctatgtg
gagtccaatccggatgtgcgcccgcagctgcaacgggaagcgacccgtggcggtgacagg
ccgcaagcggacaaacctcagggtgaaggcgagaaacgcagcagcaacagccgtaaccgc
cgtcgcccccgtcgtcgcaagcccaaagcggccgaatga
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