Aeromonas rivuli: KYK33_05635
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Entry
KYK33_05635 CDS
T07884
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ariv
Aeromonas rivuli
Pathway
ariv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ariv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KYK33_05635 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ariv03019
]
KYK33_05635 (pnp)
03016 Transfer RNA biogenesis [BR:
ariv03016
]
KYK33_05635 (pnp)
Enzymes [BR:
ariv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KYK33_05635 (pnp)
Messenger RNA biogenesis [BR:
ariv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KYK33_05635 (pnp)
Transfer RNA biogenesis [BR:
ariv03016
]
Prokaryotic type
tRNA degradation factors
KYK33_05635 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
CsrA
KH_SLS1_2
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UBO75031
LinkDB
All DBs
Position
1167543..1169690
Genome browser
AA seq
715 aa
AA seq
DB search
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PAVSPDIVALIGASAALATSGIPFGGPIGAARVGYMNGQYVLNPTTTELPLSDLDLVVAG
TANAVLMVESEAAILSEEVMLGAVVYGHEQMQVAINAINEFAADVATQPWDWTPPAVNEP
LKAKIAELATAELGEAYRITEKAVRYAAIGAIKQRVVEQVIASGVEADAKKIGEAFHNLE
SRIVRGRVVRGEPRIDGRDPEMIRALHVGTGVLPRAHGSALFTRGETQAMVVATLGTERD
AQNIDELTGHRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSAAEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTQGITALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRSEISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRISAVA
NEAAMEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADHLTIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAPAADVAVAATEEPAAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagtcattccagtacggtcaacacaccgtcacactggaaaccggt
gtgatggcccgtcaagccactgcggccgttatggtcagcatggacgatacctgcgtattt
gtgaccgttgttggtaagaaagaggccgaccacggtcgcgatttcttcccgctgaccgtc
aactatcaggagcgtacctatgctgctggtcgtatcccgggtggtttcttccgtcgtgaa
ggccgtcccagcgaaggtgagaccctgatctcccgcctgatcgaccgccctatccgcccg
ctgttcccggaaggcttcctcaatgaggttcaggtggttgccaccgtcatgtccgtgaac
ccggccgtgtcccctgatatcgttgccctgatcggtgcctccgccgccctggccacctcc
ggcatcccgttcggcggccctatcggtgctgctcgcgtcggttacatgaacggccagtat
gtgctgaacccgaccaccaccgaactgcccctgagcgatctggatctggtggttgccggt
accgccaacgcggtgctgatggtggaatccgaagcggccatcctctctgaagaagtgatg
ctgggcgcggtcgtttatggccacgagcagatgcaagttgcgatcaatgccatcaacgaa
ttcgccgccgacgtagctacccagccatgggattggaccccgcctgccgtcaacgagccg
ctgaaggccaagattgccgagctggcaaccgctgaactgggtgaagcctaccgcatcacc
gagaaggccgtgcgctacgccgccatcggtgccatcaagcagcgtgtggtcgagcaggtt
atcgcctccggcgtggaagccgatgccaagaaaattggtgaagccttccacaatctggaa
agccgcatcgtccgtggtcgtgtggtccgtggtgagccgcgtatcgatggtcgcgatcca
gagatgatccgtgccctgcacgttggcaccggcgtactgccgcgcgctcacggctccgcc
ctgttcacccgtggtgagactcaggccatggtcgttgcgaccctgggtaccgagcgtgac
gcccagaacatcgacgagctgaccggccaccgtgccgaccgctttatgctgcactacaac
ttcccgccgtactgcgtcggtgagactggcatgatggggagcccaaagcgtcgtgaaatc
ggtcacggtcgtctggccaagcgcggcgttgctgccgtgatgccgagcgccgccgagttc
ccgtatgtggtgcgtgtggtctctgagatcaccgaatccaacggttcctcctccatggcc
tccgtctgtggctcctccctggcgctgatggatgcgggtgtgccgatcaaggcctccgtt
gccggtatcgccatgggtctggtgaaggaagaagaaggtttcgtggtgctgtccgacatc
ctgggtgacgaagatcacctgggtgacatggacttcaaggttgccggtaccacccagggc
atcactgcgctgcagatggacatcaagattgaaggcatcaccaaagagatcatggagatt
gccctcaagcaagctcgtggcgctcgtctgcacattctgaaggtcatggacgaagccatc
caggctccgcgcagcgagatctccgatttcgcaccgcgtatccacaccatcaagatcaat
cctgagaagatcaaggatgtgatcggcaagggtggctccgtgatccgtgccctgaccgaa
gagaccggcaccaacatcgagctggatgatgacggtactgtccgcatctccgccgttgcc
aacgaagccgccatggaagccatccgtcgcatcgaggcgatcaccgccgagatcgaagtg
aaccgcatctatgaaggcaaggttgtgcgtctggccgatttcggtgccttcgtcaacatt
ctgccgggtaaagacggtctggtgcatatctcccagatcaccgatgcccgcgtacagaac
gtggctgaccacctgaccataggtgacgtggtcaaggtcaaggtactggaagtggatcgt
caaggccgtgtgcgtctctccatcaaggaagcgaatgcaccgaccgaggctgccgctccg
gccgccgatgtggccgttgccgccaccgaagagccagctgccgagtaa
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