Aeromonas rivuli: KYK33_14030
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Entry
KYK33_14030 CDS
T07884
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ariv
Aeromonas rivuli
Pathway
ariv03420
Nucleotide excision repair
ariv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ariv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KYK33_14030
03430 Mismatch repair
KYK33_14030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ariv03400
]
KYK33_14030
Enzymes [BR:
ariv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KYK33_14030
DNA repair and recombination proteins [BR:
ariv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KYK33_14030
MMR (mismatch excision repair)
Other MMR factors
KYK33_14030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
UvrD_C
UvrD_C_2
AAA_16
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UBO72966
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Position
3053909..3055756
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AA seq
615 aa
AA seq
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MSETAVADADTIIGTCLSLSTPKSFFLYAGAGSGKTHSLVEAIRELKSRERERLIFEGRR
IAVITYTNAACDEILQRLEFDPLVEVSTIHAFAWRLIKGFDNEIREWLRIKLAQDIEKIE
GGLARARGDNKTSRANQRKLQNKIRRLETLDEITKFIYSPTGDNRERQALNHDEVIKLTA
TFATERPLLDVLVDRYPVVLIDESQDTHAPVMEAFLKVQRLAQTRFCLGLLGDTMQQIYG
HGVTRLDKEIPGDWLKPEKVVNHRCPRRVVDLINVIRRTADTHQQTPKPDAIEGVVRMYC
ISQSQEQAPNFEESIAHSMAAITGDSEWAIGPEGRKTLILEHKMAGRRMGFEKLFTPLYS
VEHLQTGLLDGTLPALRVFSEGVLPILTAKDDHFLILEAIRTSSPLLSKDTMQSTGDQSA
HMQRVEDATHALLALFEENDPTLNEVATLLLQTQLLDVPEALIGAIVLGAPGEAPDPEDM
NAMTNYAYQLFLERPFSELAAFASYADGLSPYGTHQGVKGLEFPRVMVVINDEEAGGFLF
SYDKLLGVKEPTKTDRDNERDGKDNALARTRRLLYVTCSRAEKSLAIVVYTPQPTLAKRN
VVAAGWLQESEVEIL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagactgctgtcgcagacgccgacaccatcattggaacctgtctgagcctctcc
accccgaagagtttttttctttacgcaggagctggctcaggaaaaactcattcactcgtc
gaggctatccgagaactcaaaagtcgcgaacgagaacgcttgatattcgagggccggcgc
attgcagtgatcacctatacaaacgcagcctgcgatgagattctccaaaggctagagttc
gatccactcgtagaagtctcgaccattcatgcgtttgcctggcgtctaatcaaaggattc
gataacgagatcagggagtggctaaggatcaaacttgcccaggacattgagaagatcgag
ggcgggctggcacgcgcgcgaggcgacaataagacatctcgagcaaaccaacggaagcta
caaaacaaaatacgcagacttgagactctcgatgagattacgaagttcatctacagcccc
accggtgacaaccgagagcggcaggcactcaaccacgatgaggtcatcaagttaactgcg
acattcgctactgaacgccctttgttggatgttctagtagaccgctacccagttgtactg
atcgacgaaagccaggatacccacgctccagtaatggaggcttttctgaaagtccagcga
ttagcacagacacgcttctgcctgggactactgggcgacacaatgcaacaaatttacggc
catggtgtaacgcgccttgataaagagataccgggtgactggctgaaacctgaaaaggtc
gttaatcaccgctgccctcgtagggtggtagaccttatcaacgtgattcgacgcaccgca
gacactcatcagcagaccccaaagcctgatgccattgaaggtgttgtgcgcatgtactgc
attagtcaaagccaagaacaagcaccaaattttgaggaaagcatcgctcattcgatggca
gcaatcaccggcgacagcgaatgggctatcggccctgaaggtcgaaagacattgatccta
gaacacaagatggcaggacggcggatggggttcgaaaagctgttcacgcccctatactcg
gttgagcaccttcaaacaggcttgttggatggaaccctgcccgcacttcgcgttttcagc
gaaggtgttcttcccatccttaccgcaaaggacgatcacttccttatacttgaagccata
cgcactagctctcccttgctcagcaaggacactatgcagtcaacaggggatcaatcggcc
cacatgcaacgtgtagaggatgcgacgcatgccctgcttgcccttttcgaagaaaacgat
ccaactttgaacgaggttgcaacgcttctgttgcaaacccaactacttgatgtccccgag
gctctgattggggcaatagtgttgggtgcccctggtgaggccccagaccccgaagatatg
aacgcgatgaccaactacgcctaccaactattccttgagcggccattttcggagttagca
gcctttgcgagttatgcggatggcctttcaccctacggcacacatcaaggagtaaaggga
ctagagtttccacgagtcatggttgtcatcaacgatgaggaggcaggtggcttcttattc
agctacgacaaattgctgggtgtaaaagagccaacaaagactgaccgggacaacgagcgg
gacggtaaggacaacgcactagcacgcactcgtaggctgctttatgtgacgtgtagtaga
gctgaaaagagcctggcgattgtcgtatataccccccagccgacacttgccaagcgaaac
gttgttgctgctggctggcttcaggagagcgaggtcgaaatcctgtga
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