Aeromonas rivuli: KYK33_14790
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Entry
KYK33_14790 CDS
T07884
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ariv
Aeromonas rivuli
Pathway
ariv03030
DNA replication
ariv03430
Mismatch repair
ariv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ariv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KYK33_14790 (dnaE)
03430 Mismatch repair
KYK33_14790 (dnaE)
03440 Homologous recombination
KYK33_14790 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ariv03032
]
KYK33_14790 (dnaE)
03400 DNA repair and recombination proteins [BR:
ariv03400
]
KYK33_14790 (dnaE)
Enzymes [BR:
ariv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KYK33_14790 (dnaE)
DNA replication proteins [BR:
ariv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KYK33_14790 (dnaE)
DNA repair and recombination proteins [BR:
ariv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KYK33_14790 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UBO73103
LinkDB
All DBs
Position
complement(3220030..3223509)
Genome browser
AA seq
1159 aa
AA seq
DB search
MAEPSFIHLRVHSDFSMVDGLQKIGPIVSAAAADGQPALALTDQVNMCGLVRFYGAAHGK
GIKPIVGTDFWAQSDELGDELFRLTLLAMDNEGYQNITLLISRAYQRGHVQDKPVIDKAW
LSDHAKGVIVLSGGREGDVGKFLLKGNRPQTEQCLAFYRQHFPDAYYLELLRTERPDEEA
YLHMAVALASEFALPVVATNEVVFLNAEDFDAHEIRVAIHDGYTLADKRRPRNYSPKQYL
RSQAEMAELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEEFLVAKSQEGL
EERLAFLFPDEEVRAAKRGEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAE
MYGRDAVSQIITFGSMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDSEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPIDIAAIPIDDKKSFALL
QRFETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKRGDEA
ISYPDATWQHESLKPILEPTYGIIVYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPAEM
AKQRSGFEEGAVKNGIDGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILAARDSDGPFRDLFDFCNRVDIKKINKRVMEKLIYSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAFGQVDMFGVLTHEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSSELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQRIDERFFQRFSEILEPARAGVCPVQVHYRRPGSRVRLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcctagctttatccatctgcgcgttcattccgatttctccatggtcgatggc
ctgcagaagataggccccatcgtcagcgccgccgccgccgatggtcaaccagccctggcg
ctgaccgatcaggtcaacatgtgtggtctggtgcgcttctatggggcggcccatggcaag
gggatcaagcccattgtcgggaccgacttctgggcgcagagcgacgagttgggggacgag
ctgtttcggctcaccctgctggccatggacaatgagggttaccagaacattaccctgctc
atctcccgtgcctatcagcgtggtcatgtgcaggacaaacccgtcatcgacaaggcctgg
ctgagcgatcatgccaagggggtgatagtgctctccggtgggcgggaaggggatgtgggc
aagtttttgctcaaaggcaaccgaccgcagaccgagcagtgtctcgcgttttatcgtcag
cacttccccgatgcctattacctcgagttgctgcgcaccgagcggccagatgaagaggct
tatctgcacatggcggtggccctcgccagcgagttcgcgctgccggtggtggccaccaac
gaggtagtgttcctcaacgccgaagactttgatgcccacgagatccgggttgccatccac
gacggctacaccctggcggacaagcgcaggccgcgcaactacagccccaagcaatatctg
cgcagtcaggccgagatggccgagctgttcgccgacatccccgaggcgctggagaacacg
gtcgagatcgccaagcgctgcaacgtgacggtgcgccttggggagtatttcctgcccaac
ttcccgaccggcgacatgaccacggaagagtttttggtggcaaaatcccaggaggggctg
gaggagcgactcgccttcctgttcccggacgaggaagtgcgcgccgccaagcgcggggag
tatgacgagcgcctcgacatcgagctcaaggtgatcaaccagatgggcttccctggctac
ttcctcatcgtgatggagtttatccagtggtccaaggataacggcatcccggtcggcccg
ggccgaggctcgggggcgggatccctggtggcctatgccctcaagatcaccgatctcgac
ccgctggaatttgacctgctgttcgaacgcttcctcaacccggagcgggtctccatgccc
gacttcgacgtcgacttctgcatggacaggcgtgacgaggtgatagaccacgtcgccgag
atgtatggtcgggatgcggtctcccagatcatcaccttcggcagcatggccgccaaggcg
gtggtgcgggatgtgggccgggtactgggtcacccttatggcttcgtggaccgtatctcc
aagctgatacccccggatccgggcatgaccctcgccaaggcgttcgaggccgaacccaag
ctgcccgaactctacgagcaggacgaggaggtcaaggatctcatcgacatggcgcgccgc
ctcgaaggggtggtgcgcaacgccggcaagcacgccggtggtgtggtaatagcgcccacc
aagatcaccgatttcgcccccctctattgcgacagtgaagggcatcacccggtcacccag
ttcgacaagaacgatgtggaatacgcaggcctggtgaagtttgacttcctggggctgcgc
accctcaccatcatcgactgggcactcggcatgatcaacccgcgcctggccaaggagggc
aagccgccgatcgacatcgccgccattcccatcgatgacaagaagtcgttcgccctgttg
cagcgcttcgagaccacggcggtgttccagctcgaatcccgcggcatgaaggatctgatc
aagcggctgcagcccgactgtttcgaagacatgatagccctggtggcactgttccggccg
ggcccgctccagtccgggatggtggacaacttcatcgagcgcaagcgcggggatgaggcc
atctcctacccggatgccacctggcagcacgagagcctcaaacccatactggagccgacc
tacggcatcatcgtctatcaggaacaggtgatgcagatagcccaggtgctggcgggctat
accctgggtggggcagacatgctgcgccgggccatgggcaagaaaaacccggccgagatg
gccaagcagcgctcggggtttgaagaaggggcggtcaagaacggcatcgacggcgagctg
gcggtgaagatcttcgatctggtggaaaagtttgcgggctacggcttcaacaagtcgcac
tctgccgcctacgccctggtctcctaccagacgctctggctcaagacccacttcccggcc
gagttcatggcggcggtgatgaccgccgacatggacaacaccgacaagatagtgaccctg
gtggacgagtgccagcgcatggggctgaccgtgataccgccggacgtgaacaccggccgc
taccggttcagcgtcaatgaagatggtcatatcgtctatggcataggcgcggtgaagggg
gtcggcgagggccccatcgatgccatactggcggcgcgagacagcgacggtcccttccgg
gatctgttcgatttctgcaaccgggtcgacatcaagaagatcaacaagcgggtgatggag
aagctcatctactccggggccatggacagactgggcccgcaccgcgcggcgctgatggcg
acgctggaggaggcgatgcgcgccgccgagcagcacgccaaggcgcaggcatttggtcag
gtcgacatgttcggggtcttgacccatgagattgatgacgtcaagaaggcgttcgccaac
gtgccgcactggccggacaaggtctggctggaaggggagcgcgagaccctcgggctctat
ctgaccggccaccccatcaaccagtacagcagcgaactgcgccgctatacctcggggcgg
ttgtgcgacttgcatcccacctcccgggatacggtgaccacggcggcggggctggtgatc
gcggctcgcagcatggtgaccaagcgcggcaacaagatggggatcttcaccctggatgac
agatccgggcgtctggatgtgacactattcagtgaagcactggaaaaatacgaagaattg
atgcaaaaagaccgtattttggtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgtgaactgctggacatcaatgatgcgagggagcgtttcgcc
agggcgatccgtatttctctcgacgaacagcgtatagatgaacgcttttttcagcgtttt
agcgagattttggagcccgctcgtgccggagtctgtccggttcaggtacactatcggcgc
cccggctcccgggtgcgactgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgtgtcctgctgggacgagagcgggtggaattggtttttgattag
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