Aeromonas rivuli: KYK33_15840
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Entry
KYK33_15840 CDS
T07884
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ariv
Aeromonas rivuli
Pathway
ariv03410
Base excision repair
ariv03430
Mismatch repair
ariv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ariv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KYK33_15840 (recJ)
03430 Mismatch repair
KYK33_15840 (recJ)
03440 Homologous recombination
KYK33_15840 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ariv03400
]
KYK33_15840 (recJ)
DNA repair and recombination proteins [BR:
ariv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KYK33_15840 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KYK33_15840 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KYK33_15840 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
bHLH_IRO3
Motif
Other DBs
NCBI-ProteinID:
UBO73294
LinkDB
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Position
complement(3430727..3432457)
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AA seq
576 aa
AA seq
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MSLQIRRRPRVDDAHLPDTLHPLLRQIFASRGVEDPALLERSASQLLPPQRLFGMEQAVP
LLAGALTAQKRILIVGDFDCDGATSSALCVLALRAMGGQSVDFLVPNRFEFGYGLTPEIV
ALAVARGAEFLITVDNGISSIAGVAAAKAAGMQVLVTDHHLPGHELPAADAIVNPNQRGC
DFPSKSLAGVGVAFYLMAALNTHLRQSGWYERLGIRPPNVADYLDLVALGTVADVVALDG
NNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRLCAADLGFALGPRLNAVGRLDDMSL
GVACLLSDDINLARQLAAEMDSLNQERKEIEQGMQQEALATLEQIRFRDGEVPSGIVLHR
DEWHQGVVGLVASKIKEKYYRPVIAFAESSDTELKGSGRSIPGVHLRDALELLDTRHPGL
MGKFGGHAMAAGLTLPKANIEAFGRAFEAVIAELVTPELLTGVLLTDGELLPDELSLELA
ELIRASGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKMMLTTDSGHAVDAIAFGVDLKRWP
DASVKRVRLVYRLDVNEWRGNRSVQLLVEHLEAAGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcaaattcgtcgtcgtccccgggtggatgatgctcatctccccgataccctg
catcccttgctgcgtcaaatcttcgccagtcgcggggtggaggatcccgccctgctggag
cgcagcgccagccagctgctgccgccccagcggctgtttggcatggagcaggcggtgccg
ctgctggccggggcgctgactgcccagaaacgcatcctcatcgtcggcgacttcgactgc
gacggcgccaccagctcggccctgtgcgtgctggcgctgcgggccatgggagggcagagt
gtcgatttcctggtgcccaaccgcttcgagttcggttatggcctcaccccggagatcgtc
gcgctggcggtggctcgcggcgccgagtttctcatcacagtggataacggcatctccagc
atcgccggggtggccgccgccaaggccgccgggatgcaggtactggtcaccgatcatcac
ctgccgggtcatgagctgcctgctgccgatgcgatagtgaaccctaaccagcgtggctgc
gattttccctccaagtccctggccggggtgggggtggccttctacctgatggcggccctc
aacacccatctgcgccagagcggctggtatgagcgactcggcattcgtccccccaacgtg
gcggactatctcgatctggtggcgcttggcacagtcgccgacgtggtggcgctggatggc
aacaaccgtatccttgtccatcaggggctgcagcggatccgggccggtcgctgccgcccc
ggcatccaggcgctggtggacgtgtcgggccgcgatggtcgccgcctgtgcgccgccgat
ctcggcttcgccctggggcctcgcctcaatgcggtgggccggctggatgacatgtccctc
ggggtcgcctgtctgctgagcgatgacatcaatctggcgcgtcagcttgcggcggagatg
gacagcctcaaccaggagcgcaaggagatagagcagggcatgcagcaggaggcgctggcc
accctggagcagatccgttttcgcgacggcgaggtgcccagcggcatagtgctgcacagg
gacgagtggcatcagggggtggtgggcttggtggcctccaagatcaaggagaagtactac
agaccggtgatcgccttcgccgaaagcagcgacaccgagctcaagggctccggccgctcc
atccccggggtgcacttgcgcgatgccctcgagctgctcgatacccgccatcccggtctg
atgggcaagtttggcggccacgccatggcggcggggctgacgctgcccaaggccaatata
gaggcgttcggccgggcgtttgaggcggtcatcgccgagctggtgaccccggagctgctg
accggggtgctgctcaccgacggcgagctgctgcccgacgagctgagtctggagctggcg
gagctgatccgcgcctcgggcccctggggccaggccttcccggagccgctgttcgatggc
gagttcgtgctggtccagcagcggctggtgggggagaagcacctcaagatgatgctgacc
acggattccggccatgcggtagatgccattgccttcggggtggatctcaagcgctggccc
gatgcctcggtcaaacgggtgcggctggtctaccggctcgatgtcaacgagtggcgcggc
aaccgcagcgtccagctgctggtggagcatctggaggccgccggtctctag
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