Aeromonas rivuli: KYK33_18225
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Entry
KYK33_18225 CDS
T07884
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ariv
Aeromonas rivuli
Pathway
ariv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ariv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KYK33_18225 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ariv03400
]
KYK33_18225 (recD)
Enzymes [BR:
ariv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KYK33_18225 (recD)
DNA repair and recombination proteins [BR:
ariv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KYK33_18225 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
Viral_helicase1
SH3_13
UvrD-helicase
AAA_22
AAA_16
nSTAND3
CbiA
AAA_28
NTPase_1
SLFN-g3_helicase
TraI_hel_assoc_N
SRP54
T2SSE
UvrD_C
MobB
Motif
Other DBs
NCBI-ProteinID:
UBO73719
LinkDB
All DBs
Position
complement(3965448..3967487)
Genome browser
AA seq
679 aa
AA seq
DB search
MKSDGMIERLKALALAGRIRQLDLQFAKLVADLGGGPELVLGAALACFELGRGHVCLPLD
MLAAGSLRPFGLDPDQSRDLLGDLADPASWPTLFAASPLVGTEQNGGLAPRWPLRLWHGR
LYLTRYHDFELGVARHLRALSERAEWPEIAPALSRLFARDYGLVFDALLKARLAPDFSAR
HFVEKYLDLVFPDEVDWPAIEALLGSAQAASDLGKLDTLVPESLCCNGQKLAAATAAARP
FAVISGGPGTGKTTTVAKLLAILVETGLQAGKAPAIRLVAPTGKAAARLTESIGSALQAL
DLPPEWAQAIPTEAGTLHRLLGVIPGRSQFRHHAGNPLHLDLLVVDEASMVDLPMMARLL
DALPSHARLILLGDKDQLASVEAGAVLGDICSFIEQGISPAQADWLSRQTGYRLQGSPAG
APVRDSLCLLSKSWRFDQHSGIGQLARACNDGDAAAVESVWSAGFKDISLHPWAGEAYEA
LIAQGVAGYGSYLKAARAGEEASAVFKAFNGFQILCALRDGPFGVLGLNERLELALSRAG
LIQRDGDWYAGRPVMVVRNDHGIGLYNGDMGLCLPDETGRLKVWFEQPDGSLRALLPSRL
PPHETVYAMTIHKSQGSEFAHTVLVLPDSPSPLLTRELVYTGITRAKAHLDLYGDRALLA
QAVRKKTERYSGLAERLGE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgacggtatgatcgaacggctgaaagccctggcgctggcggggcgtatccgc
cagctggatctgcaatttgccaaactggtggccgatctgggcggcggccccgagctggtg
ctgggggccgcgctcgcctgcttcgagcttgggcgcggccatgtctgcctgccgcttgac
atgctcgctgccggatccctgcgccctttcggactggatccggatcagagccgggatctg
ctgggggatctcgcggatcctgcgagctggcccaccctctttgcggcaagccccttggtt
ggcaccgagcagaatggcgggcttgccccgcgctggccgctgcggctctggcacgggcgc
ctctacctcacccgctaccacgattttgagctgggggtggctcgccacctgcgtgcctta
agtgaacgtgccgaatggcccgagatagccccggccctgtcgcgcctctttgcccgcgac
tacgggctggtgttcgatgcactgctcaaggcccgcctcgcccccgacttctcggcccgc
cacttcgtcgagaagtatctggatctggtgttccccgacgaggtggattggcccgccata
gaggcgctgctggggagcgcccaggcggcgagcgatcttggcaagctggataccctggtg
cccgagtcgctctgctgcaacggccagaagctggcggcggccacggcggcggcgcgcccc
ttcgcggtgatctcaggcggccccggtaccggcaagaccaccactgtggccaagctcctg
gccattctggtggagacaggcctgcaagcaggcaaggccccggcgatccggctggtggcc
cccaccggcaaggcggcggcgcgcctcaccgagagcattggctctgctttgcaggcgctg
gatttgcccccggagtgggcccaggccatccccacagaggcgggcaccctgcaccggctg
ctcggggtgatcccggggcgcagccagttccgccaccacgcgggcaacccgctgcacctc
gacttgctggtggtggacgaggcctccatggtcgacctgcccatgatggcgcgcctgctc
gatgcgctgccgagccacgcccgcctcatcctgctcggcgacaaggatcagctcgcctcg
gtagaggcgggggccgtgctcggggatatctgcagctttatcgaacagggcatcagcccc
gctcaggcggattggctctcccgccagaccggctaccgcctgcagggttcgcctgccggt
gcaccggtgcgcgacagcctctgtttgctttccaagagctggcgcttcgatcagcactcc
ggcataggccagctggcgcgggcctgcaacgacggcgatgccgccgcggtggaatcggtc
tggagtgcgggattcaaggacatcagcctgcacccttgggcgggggaggcctacgaggcc
ctgattgcccagggggtggccggttatggcagctatctgaaggccgcccgcgccggagaa
gaggcgtctgccgtgttcaaggcgttcaacggcttccagatcctctgcgccctgcgggac
ggccccttcggggtgctgggtctcaacgagcgcctcgaattggccctctccagggcgggg
ctgatccagcgcgacggcgactggtatgcgggccgccccgtgatggtggtgcgcaacgac
cacggcatcggcctctacaacggcgacatggggctctgcctgccggacgaaaccggccgc
ctcaaggtgtggttcgagcagccggacggcagcctgcgcgcgctcttgccaagccgattg
ccgccccacgagactgtctacgccatgaccatccacaaatcccagggctcggagtttgcc
catacggtgctggtgctgcccgacagccccagccccctgctgacccgcgagctggtctat
accggtatcacccgcgccaaggcgcacctcgatctctacggcgatcgcgccctgctggct
caggccgtgcggaaaaagaccgagcgctattccggactggcggagaggttgggggagtga
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