Acinetobacter radioresistens: DOM24_01545
Help
Entry
DOM24_01545 CDS
T05620
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
arj
Acinetobacter radioresistens
Pathway
arj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOM24_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arj03019
]
DOM24_01545
03009 Ribosome biogenesis [BR:
arj03009
]
DOM24_01545
Enzymes [BR:
arj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DOM24_01545
Messenger RNA biogenesis [BR:
arj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DOM24_01545
Ribosome biogenesis [BR:
arj03009
]
Prokaryotic type
rRNA processing factors
DOM24_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AWV85327
LinkDB
All DBs
Position
complement(337113..340622)
Genome browser
AA seq
1169 aa
AA seq
DB search
MKRMLINATHAEEVRVALVTGHRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GANRQGFLSMREIANSYFKADSRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGAVREELKEMLASLDVPRGMSVIVRTAGIGRSQEELQT
DLQHLLDLWTQIQSTANSGPSPMLVHQEAGVVTRAIRDYLRDDVSEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALSTNLEAAEEIARQLRLRDIGGLIVIDFIDMTRDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALHERQGEVQVEVPVEIAAFMLNEKRHSLVYLEQTSNTRVTVLPHPHLETPHY
EISYNPEGFAPTSYERTEATRSSEKNLGYESADWHLEEAEQVGQNTAAPADKPGKPQNRK
AQPQAAAPQQPAQVPAAKTATSSPCAWLENLFVQKQAHTVDHSRTANNAAAAIEQMVNTG
AVSRGQFGQINNTAVAVQPETVVAPVAANNVYLSQPAGNSTAKTDAQPLEREEKASGQQR
HNKKRNGRDRDNRDRNREPREQQSETSTQVHEEVVQLSRQEQRDQKRQQQKRQPQQEHQV
ESQQSEQSYPVPRRDRNQQRPPRPNRYRDPSVLNEQPVVAAAPAAVTDSNQVKVDVIETP
NNEALATALVINIDQGQSEIITLNSADIASTVNAEEAPVEVKPEPAAPAKKEAVNAQPAP
AEAKAKAKVEEQPRRASNDPRMRRKQGGSQQKPQQEVLPKLSPSQVPLLAQYTVGSLIRH
VYGEDCTVLIEQFGLVPTFNRALLKFTEQYISTLSVTTTTERTEPVEKTPVTRDAAAPMA
KPAQEQEPAPVLPLTPSQNATPRVANDPRERRRLAKLAAEQALEQSKASASQAEEQPAAV
QSENPVAENPAEHVNLEINAQADITSVGTEQDAADAASHHAKVVAETQAQDPAIQTAAAM
SEATAAASPSAIVEEAQAQQAAEPAAPAEKKAPKPSKVEKSQPADQQPAQASVEETAEDD
KTTTADKDKPARPRRPRGRPPKKATPTAE
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgatcaatgcaacacatgctgaagaagtacgcgttgcacttgtcact
ggtcaccgtctatacgattttgatctcgaaaatcgtacccgtgaacaaaagaaatctaat
atctataaaggtcatgtgacccgtgtagaaccttctcttgaagctgtctttgttgaatat
ggagcaaatcgtcaaggtttcttgtcgatgcgtgaaattgcaaattcctatttcaaagct
gactcgcgccagacttcaaacatccgtgaactaattactgaagggaccgagcttctggtc
caggtggaaaaggaagaacgcggcaataaaggcgcagcactgtctacctttatctctctt
gctggccgttatctggttctgatgccgaataatccgaaaggtggtggtatcagccgtcaa
atttcaggtgcagtgcgtgaagaactcaaggaaatgctggcctctttagatgtaccccgc
ggcatgagcgtgattgtccgtacggcaggtattggtcgcagccaggaagagctgcaaacc
gatttacagcatttgcttgacctgtggacccagattcagagtacggctaattcaggccct
tccccaatgctggtacatcaggaagctggtgtagtaacacgcgcaatccgtgattatctg
cgtgatgatgtgtccgagatcctgattgattcagaacaggcttacaatgaagcttataac
tttgtcaaagcagttatgccacgtcagctggacaagttaaaaacttatactttaaatgag
cctctgtttgcacatttcggtattgagagccagatccagaccgcttatgaacgtgaagta
aaattgccttcaggtggatcaattgtaattgaccagactgaagcgctggtttcaattgac
atcaactcggcaaaatcaacgcgtggtcatgatgtagaagaaacagcactttcgactaac
cttgaagcggctgaagaaattgcccgtcaattacgccttcgcgatattggtggtctgatc
gtgatcgattttattgacatgactcgtgaccgtaaccagcgcatggttgaagccaagtta
cgtgaagctacccagagtgaccgcgcccgcatccagtttggccagctctcacgttttggt
cttatggaaatgagccgtcagcgtctgcgcccttctctagaagaagcgactggctatgtc
tgcccgcgctgtcatggtacaggtatggtacgtgacttgcgttcactgtcgctgtctatc
atgcgtaaagttgaagaaattgcgctacatgaacgtcaaggtgaagttcaggttgaagtg
ccagtagaaatcgcggccttcatgctcaatgaaaaacgtcatagcctggtttatctggaa
caaacttcaaatacacgtgtcactgtacttccacatccacacttggaaactccacattac
gaaatttcatataaccctgaaggttttgcaccgaccagctatgaacgtactgaagctacg
cgttcgagtgaaaaaaacctgggttatgaatctgccgactggcatctagaagaagctgaa
caggttggacagaacacggctgccccagctgacaagccaggtaaaccacaaaaccgtaaa
gcacagcctcaggctgctgccccgcaacaacctgctcaagtgcctgccgcaaaaactgca
actagcagtccatgtgcttggctcgaaaacctgtttgtacaaaaacaggcacacacggta
gatcattcgcgtacagccaacaatgccgctgctgcaattgaacagatggtgaatacaggt
gcagttagccggggccagtttggccagatcaataatactgctgtagcagtacaaccagaa
acggtggttgcgccagttgctgccaataatgtttatctgtcacaaccggcaggtaatagc
actgcaaaaactgatgcacaaccactcgaaagagaagaaaaagcttcaggccagcagcgt
cataacaaaaaacgtaatggtcgcgatcgcgataatcgtgacagaaaccgtgaaccacgt
gagcagcaatctgaaacttcaactcaggttcatgaggaagtagttcagttatcacgtcag
gaacagcgtgatcagaaacgtcaacagcagaaacgtcaacctcagcaggaacatcaggta
gaaagccagcagtctgagcagtcataccctgtaccacgccgcgaccgcaatcagcaacgc
ccaccgcgcccgaaccgctatcgtgatccaagcgtgctgaatgaacagcctgtggtagct
gccgcgcctgctgcagtgacagatagcaaccaggtaaaagttgatgtcattgaaacccca
aacaatgaagctcttgctactgcattggtaatcaatattgatcagggtcaaagtgaaatc
ataacgctaaattctgcagatatagcgtcaactgtaaatgcagaagaggcaccggttgaa
gtaaaacctgagccagctgctccagccaagaaagaagctgtaaatgctcaaccagccccg
gctgaagcaaaagcgaaagccaaagttgaagagcaaccacgccgtgccagtaatgatccg
cgtatgcgtcgcaagcaaggtggctcacagcagaaaccacagcaggaagtgctaccaaag
cttagtccttcccaagtgccactcttagcgcagtacactgtaggtagcctgatccgtcat
gtttatggtgaagactgtacggtactgattgaacagttcggactggtgccaacattcaat
cgtgctttgctgaaatttactgaacagtacatcagtaccctttcagtaaccactacaaca
gagcgcactgaacctgtagaaaaaacgcctgttacccgtgatgctgccgcgcctatggct
aaaccggctcaggaacaggaaccagcgccagttttaccactgacgccttcccagaatgcg
acaccgcgtgtagcaaacgatccgcgtgaacgtcgtcgtctggctaaacttgctgcagag
caggcattagagcagagtaaagcttcagcatctcaggcagaagagcagcctgcggctgta
cagtctgaaaatcctgtagcggaaaatcctgctgagcatgtaaatttagaaataaatgct
caagcagatataacttcagtcggtactgagcaggacgcagcagatgcagcatctcaccat
gccaaagtggtagctgagactcaggcacaggatccggcaattcagactgctgcagctatg
tctgaagcaactgctgctgcctcgccaagtgcaattgttgaagaagcacaggctcagcaa
gcggccgaaccagctgcaccagcagaaaagaaagctcctaaaccgagcaaggtagaaaag
tctcagccggctgatcagcaaccggcacaagcttcagtagaagaaactgccgaagacgat
aagacgactactgccgataaggataaaccggcccgtccgcgtcgcccacgtggccgtcca
ccgaaaaaggccacacctacagccgagtaa
DBGET
integrated database retrieval system
