Acinetobacter radioresistens: DOM24_08120
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Entry
DOM24_08120 CDS
T05620
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
arj
Acinetobacter radioresistens
Pathway
arj03030
DNA replication
arj03430
Mismatch repair
arj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DOM24_08120
03430 Mismatch repair
DOM24_08120
03440 Homologous recombination
DOM24_08120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arj03032
]
DOM24_08120
03400 DNA repair and recombination proteins [BR:
arj03400
]
DOM24_08120
Enzymes [BR:
arj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DOM24_08120
DNA replication proteins [BR:
arj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DOM24_08120
DNA repair and recombination proteins [BR:
arj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DOM24_08120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AWV86552
LinkDB
All DBs
Position
1717022..1720588
Genome browser
AA seq
1188 aa
AA seq
DB search
MQFVHLGIHTEFSITESIVRVPDLVKAAQKDEMPALALTDLSNLHAAVKFYGKCLGKGIK
PILGSEIRLNDAEHRMTLLAMTNTGWRNLTELVSEGYIRGQQLDIPCVQKEWILDQNQDL
IALLGMNSDVGKMLITSNPQKAEPLLEEWIAKFGNRVYLALTRTNRPGEDDFIIEAVKLA
QKYNIGVVAHNDVHFMTRDDFEAHEARVCIADGYVLGDNRRPKTYSPEQYFKSSEEMTEL
FSDIPSAIENTYHIAKRCNVTLQLGKYFLPDYPIPEGYTIDTFFAHLSKEGLEERLNFLY
PPEERDEHWPEIRKPYDERIEYEINIINSMGFPGYFLIVMDFIQWSKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYELLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVARTYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKLIPTKPLGLSLEESLQAEPQLKDI
VTNPSNPDYDDASEIWEMALKLEGITRNTGKHAGGVVISPTKITDFSAVMCDADGTARVA
QFDKDDVEAAGLVKFDFLGLRNLTVIEDAVKNINKRIKSDKPLDIAAIPLEDKDAYLVFA
NANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQYCAGYTLGGADLLRRAMGKKKPEEMVKQRKIFIE
GAAKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFLAAVMSS
EMQNTDNVVFLIDDCRKNNLEVLPPSVNMSIYQFHAIDEKTIVYGLGAIKGVGEAAMQSV
IDSRNQQGPYKDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERADLMAQLPEAVQAA
DQARQNRETGIMDLFGEVEEIQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPINVYRPE
LKSFVQSRLNELTPTRRGVTTVFAGLVIDVANFPNRVMITLDDGTARVEVSCNHERFQRF
KDIIQPEKVVVIEGEIYEREGYERPMARLSKAFSLNEIRQKRANSIKIQLSDDLLGPALG
LELQKILAPYCNIDMYQHIPVQLFIEQPYATAELHLGPSWKVAPLDELLAKLRDYFGKEA
LHIEYQVKSKAARVVEPVRPVHTASPASNDISMDEALELYQAEVSQYS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgttcatcttggtattcatacagagttctcgattacagaatcaatcgtacgt
gtgcctgatctggttaaagctgctcaaaaagatgaaatgcctgctctggcactgactgat
ctgtctaacctacacgcagcggtcaaattttacggaaaatgtttaggtaaaggtatcaag
cctattttaggctcagaaatccgcctgaatgatgctgaacatcgtatgaccttattggca
atgaccaatacaggctggcgaaacctgacagaactggtatctgaaggttatatccgcggt
caacagctagatattccctgcgtacaaaaagaatggatactggaccagaaccaggatttg
attgccctgctcggaatgaattctgatgtcggtaaaatgctgattacctctaatcctcaa
aaagctgaacctttgctggaagaatggatcgccaaatttggaaatcgggtttatttggcc
ctaacccgcactaatcgtccgggtgaagatgactttattatagaagcggtgaaactggcc
cagaagtataatattggtgtagtggcacacaatgatgtgcacttcatgacccgagacgac
ttcgaagcgcatgaggcccgggtctgtattgctgatggttatgtccttggtgataatcgc
cgtccgaaaacctattcgcccgaacagtattttaagtcttctgaagagatgaccgagctg
ttctcggatattccgtcagccattgagaatacttatcatattgctaaacgttgtaacgta
accttgcaactgggtaagtacttcctgccggattatccgattccagagggttatactatt
gataccttctttgcgcatttgtccaaagaaggcctcgaagagcggttaaatttcctttat
ccacctgaggagcgtgatgaacactggccggaaatacgtaagccatatgatgaacgtatc
gaatacgagattaatattattaactcgatggggtttccgggctacttcctgattgtaatg
gacttcattcaatggtcaaagaataatggcgtaccggtaggcccgggccgtggttcaggc
gcaggttctctggttgcttatagtttaaaaattactgatcttgatccgctgcgttatgaa
ctgctgtttgaacgtttcttaaatccggaacgtgtttcgatgcctgacttcgatgtcgat
ttctgtatcgctggccgtgaccgtgtaattgattatgtagcacgtacttatggtcgtgat
gccgtctcccagattgctacttttggtactatggcggctaaaggagcgattcgtgatgtg
gcccgggttctaggtaaatcttatggactggcagatcgtatttccaaactgattccaact
aaacccttgggcttaagtctggaagaatccttgcaagctgaacctcagcttaaggatatt
gttaccaacccatccaacccggattatgatgatgcttcagagatctgggaaatggcgcta
aaactggaaggtattacccgtaatactggtaaacatgccggtggtgtagtgatttcaccg
accaagattaccgatttttctgcagtcatgtgtgatgctgatggtacggcgcgcgtagcg
cagttcgataaggatgacgtagaagcagcaggtctggtaaagtttgactttctgggtttg
cgtaacctgacagtgattgaagatgcagtcaagaatatcaataaacgtattaaaagcgat
aaacctttagatattgctgctattccacttgaagataaagacgcttatctggtctttgcc
aatgccaataccactgcggtattccagtttgaatctgtgggcatgaaaaagatgctcaaa
gaagcacgtccaagcaaatttgaagaaattattgctttcgtatctttatatcgtccagga
ccgatggatctgattcctgactttattcatcgtatgcatggtggtgagtttgaatatttg
catcctctgcttgaaggcgtactagagcctacttacgggattatggtgtatcaggaacag
gtcatgcaggcggcacagtattgtgcgggttatacgcttggtggtgcggatttgctgcgc
cgggcaatgggtaagaaaaaacctgaggaaatggttaagcagcgtaaaatcttcattgaa
ggcgctgcaaaaaaagatattgatgaagctacagccaaccatatttttgattatatggaa
aaatttgccggctatggttttaataaatcacacgcagctgcctatgcattagtagcctac
cagacagcatggttaaaagcgcactatccagccgaatttctggcagcggtaatgtcgtcg
gaaatgcagaataccgataacgtggtatttttgattgatgactgccgaaaaaacaatctg
gaagttttgccaccttcggtcaatatgtcaatttaccagttccatgcaattgatgaaaaa
actattgtatatggtcttggtgcgattaaaggcgtgggtgaggctgcaatgcagtcagtg
attgactcgcgtaaccagcaaggaccgtataaagatctattcgatttctgccaccgcatt
gatctgaagaaaatcaataaacgtactttagaagcactgattcgtgccggtgcattggat
tgtctaggtattgaacgtgccgacctgatggcacagcttcctgaggcagtacaagcagca
gatcaggcccgtcaaaaccgtgaaaccgggattatggatcttttcggtgaagttgaagaa
attcagcgtaaaccagctaaacctgtaaaaccctggagtgacgaggttcgtctcaagggc
gaaaaagacactttaggcctttacctgactgggcaccctattaatgtctaccggccagaa
ctcaagtcttttgttcaaagtcggctgaatgaactgacgcctacccgtcgtggcgtgacc
actgtattcgctggtctggtaatcgatgtcgccaattttccaaaccgcgttatgatcaca
ctggatgatggtacagcacgtgtggaagtcagctgtaaccatgagcgtttccaacgcttt
aaagatattatccagcctgaaaaagtcgtagtcattgagggagaaatttatgagcgcgaa
ggttatgaacgcccgatggcgcgtctcagcaaggcttttagcttaaatgaaatccgtcag
aagcgagcaaacagcattaagatacagctaagtgatgatctgctaggcccggcattgggt
ctggagttgcaaaaaatacttgcaccttattgtaatatagacatgtaccagcatattccg
gtacagctatttatagagcagccctatgctacagcagagctacatttgggtccaagctgg
aaagttgccccacttgatgagttgctggcaaaattgcgtgattattttggcaaggaagct
ctgcatatcgagtaccaggtcaaatccaaagctgcgcgggtagtagagcctgtgcgcccg
gtacatacagcttcccccgcttcaaatgatataagcatggatgaagctttagaactttat
caggctgaagtcagccagtattcttga
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