Acinetobacter radioresistens: DOM24_09930
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Entry
DOM24_09930 CDS
T05620
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
arj
Acinetobacter radioresistens
Pathway
arj03030
DNA replication
arj03430
Mismatch repair
arj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DOM24_09930
03430 Mismatch repair
DOM24_09930
03440 Homologous recombination
DOM24_09930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arj03032
]
DOM24_09930
03400 DNA repair and recombination proteins [BR:
arj03400
]
DOM24_09930
Enzymes [BR:
arj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DOM24_09930
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
DOM24_09930
DNA replication proteins [BR:
arj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DOM24_09930
RNase H
DOM24_09930
DNA repair and recombination proteins [BR:
arj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DOM24_09930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_H
RNase_T
DNA_pol_A_exo1
RVT_3
Motif
Other DBs
NCBI-ProteinID:
AWV86887
LinkDB
All DBs
Position
2131237..2132604
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AA seq
455 aa
AA seq
DB search
MSQTITLYVDGACRGNPGLGGWGAYIITEQEEHKICGGETLTTNNRMELTAAIEGISFCP
KDAKLVIWTDSNYVKKGITEWIQGWKKKNWKDVKNPDLWQKLDATCQGREIEWNWIKGHA
GHAGNEMADQLANLGADQIMQGISTPVQAQLNSEHTSAKKSESDWLLDDPLGFDLLESEP
EHIEESPLSLPDQVELMDDGLANEIETAESSHPYVVTTEATLELHGPRQLILDTETTGFY
FQDGDRIIEVGAIEMVNRKLTGSSIHIYINPEKPVGDSVDIHGITDEFLQDKPRYAEIAE
VLFNYLKGAEIIAHNASFDMNFLDMEFKRAGFPALSEVCEVTDTLALAKSKHPGQKNSLD
ALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSEISQSQASRQVIN
VDLPVIVPSPEELAAHEEWVQHYQEKNGEPCLFAR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacaatcacactctatgtagatggtgcttgccgcggtaatcccggcttaggt
ggatggggtgcatatatcattaccgagcaggaagaacataaaatctgtggcggtgaaacc
cttactaccaataaccgtatggaattgactgctgcaattgaaggcatttcattctgccca
aaagatgccaagcttgtcatttggacagactctaactatgtcaaaaagggtattaccgaa
tggattcaaggctggaaaaagaaaaactggaaagacgtcaaaaatcctgacttatggcaa
aaactggatgcaacctgccagggacgcgaaatcgaatggaactggattaaaggacatgct
ggccatgcaggcaatgaaatggcagaccagctggcaaatttaggtgcagatcaaattatg
caaggcatcagcaccccggttcaggcacagctcaatagtgagcatacatcagcaaaaaag
tctgaaagcgactggttactggatgatccgttaggcttcgatttacttgaatcagaacca
gagcatatagaagagtcgcccctgtcattgccagatcaggttgaattaatggatgatgga
ttagctaatgaaatagagacggctgagtcaagtcatccatatgtagtcactactgaagcg
accttggagctacatggtccgcgccagctgattcttgacacggagactaccggtttttat
tttcaggatggagaccggattattgaagtcggtgccattgaaatggtgaatcgtaaactt
accggcagctcaatccatatttatatcaatccggaaaaaccggtgggtgactcagtagac
attcacggtattactgatgaattcttgcaggataagccacgttatgcggaaattgcagag
gttctttttaattatttaaaaggtgccgagattattgcccataatgccagcttcgatatg
aacttccttgatatggagttcaaacgcgcaggattccctgcattatctgaagtgtgtgaa
gtaactgataccctggcactagctaaaagcaagcatcccggacagaagaactcgctggat
gctctggttcgccgttatgaaattccagcacgagaccgtacttttcacggtgctttgctc
gatgccgagatcttgtccgatgtatatctggccatgacaggtggacaagtatcctttgat
atggatgccctgtctcaaagcgaaataagtcagtcacaggcttcacgacaagtaatcaat
gttgatttgcccgtaattgtgccttcacccgaagagcttgcggctcatgaagagtgggtt
caacactatcaggaaaagaatggcgaaccctgtttgtttgcccgataa
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