Acinetobacter radioresistens: DOM24_13675
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Entry
DOM24_13675 CDS
T05620
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
arj
Acinetobacter radioresistens
Pathway
arj03410
Base excision repair
arj03430
Mismatch repair
arj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DOM24_13675 (recJ)
03430 Mismatch repair
DOM24_13675 (recJ)
03440 Homologous recombination
DOM24_13675 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arj03400
]
DOM24_13675 (recJ)
DNA repair and recombination proteins [BR:
arj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DOM24_13675 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DOM24_13675 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DOM24_13675 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
AWV87577
LinkDB
All DBs
Position
complement(2905650..2907362)
Genome browser
AA seq
570 aa
AA seq
DB search
MPNIQVKQRPLLTRVESFQHVSPFLAHILARRGVASEQELELRLKYLLSPCLKGLEQAVE
IINQAIDQQKKIVIVGDYDADGATSTALMILALRDMGADVAYLVPDRFKYGYGLTPAIAD
LAFTRFTPDLLITVDNGISSHEGVKQAQDHGMQVIITDHHLTTKETPAAEAVVNPNQLGC
NFPSKALAGVGVAFYVLANLCSFRKRADKSVSNITQYLDLVALGTYADVASLDYNNRILI
DAGLKRIHQQQCRPGILALLDIAGREPAALKAQDLGFVLGPRINAAGRMETMEIGIECLL
APDLENAYPLARQLNQLNIERRQIEAQMKQEALRYLEQLQLSKENIPPALIMFEEHWHQG
VIGIVAGRLKEQFHRPSIVFAADEDGIHIKGSARSVEGIHIRDCIEQIAEQYPHLVRYFG
GHAAAAGLTIRKEHFLEFKQVFTQLIAEMDETLLSATLWTDGELPAEALVLDTVDLIEKL
GPWGQKFPSPVFEGTFKVVDFRWLKEAHLKLRLALNNGQVVDAIAFNAKDKFEYDPENDQ
VDLVYELERNEFNSNTGLQLRIIHLKQKIL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatattcaagttaagcaacgccctttactgacacgtgtagaaagttttcaacac
gtgtcaccctttcttgcccatattctggccagacgtggagtcgcttctgaacaagaactt
gaactcagattaaaatatctgctttctccttgccttaaaggactggaacaggcagttgag
attataaatcaggccattgaccagcagaaaaaaattgttattgtcggagattatgatgca
gatggtgcaaccagcactgctctgatgattcttgctttaagagatatgggcgcagatgta
gcctatctggttcctgaccggtttaaatatggttatggacttacgcctgcaattgcggat
ctggcttttacccgttttactcctgacctgttgattactgtagataatggcatttctagt
catgaaggggtaaaacaggcgcaagaccatggtatgcaggttattattacagatcaccat
ctgactaccaaagaaacgccagccgctgaggcagtagttaatccgaaccaactgggctgt
aattttccgagtaaagccttggctggagtaggcgttgccttttatgtacttgccaatctg
tgcagttttcgcaaaagggcagacaaatctgtcagcaatataacccaatatctggacctg
gttgccttaggtacctacgccgacgttgcgagccttgattacaataaccgtattctgatc
gatgctggtttgaaacgcatacaccaacagcagtgccgtccaggaattctggcattactt
gatattgccggacgcgaaccggcagctcttaaagcacaagatttaggtttcgtacttggg
ccgcgtattaatgcagcaggccgtatggaaactatggaaatcggaattgagtgcctgtta
gcccctgatctggaaaatgcttatcctctggcccggcaacttaatcagctaaatattgaa
cgccgtcagattgaagcacagatgaagcaggaagccttgcgctatctggagcaattacag
ttatcaaaagaaaatatacctcccgcgctgattatgtttgaagaacactggcatcagggc
gtgattggaattgtcgctggacgcttaaaagagcagtttcaccggccaagcattgtattc
gcagcagatgaagacggtattcatatcaagggatcggcccgttcggttgagggaattcat
attcgtgattgtattgagcagatcgctgaacagtatccccatctggtacgttattttggc
ggtcacgctgccgctgccggactcacgatccgtaaagagcattttttagaattcaaacag
gtttttacccagctaattgcagaaatggatgaaacgctgctctctgctacactttggaca
gatggggagctgcctgcagaagcattggttcttgacacagtggatctgattgaaaagtta
ggaccatggggacaaaaatttccgtcacctgtatttgaaggaacttttaaggttgtagac
ttcagatggcttaaagaggctcatctcaaattacgtctggcattaaataacggtcaagta
gtagatgcaattgcctttaacgcaaaagacaaatttgagtatgatccggaaaatgatcaa
gtcgatctggtctatgaactggaacgtaacgagttcaatagtaatacaggcctgcaatta
cgtatcatccatcttaaacagaaaattttataa
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