Arachidicoccus soli: D6B99_00825
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Entry
D6B99_00825 CDS
T05648
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ark
Arachidicoccus soli
Pathway
ark03410
Base excision repair
ark03430
Mismatch repair
ark03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ark00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D6B99_00825 (recJ)
03430 Mismatch repair
D6B99_00825 (recJ)
03440 Homologous recombination
D6B99_00825 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ark03400
]
D6B99_00825 (recJ)
DNA repair and recombination proteins [BR:
ark03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
D6B99_00825 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D6B99_00825 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D6B99_00825 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AYD46288
UniProt:
A0A386HK88
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All DBs
Position
173253..174959
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AA seq
568 aa
AA seq
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MEKRWNILPIDEVHERALHAVLKINTALCRILVQRGFNTFEKAKNFFRPELKSLHSPWLM
KDMDKAVARILQAFAKEERIMVYGDYDVDGTTSVAAMYSFLSTIYPKVEFYIPHRYKEGY
GISKIGIDFAKENDITLIVSLDCGIKAVDLVAYAKTLGIDFIVCDHHLPDAEVPDAIAIL
NAKQKDCNYPYKELCGCGVGFKLMQALAEKLNLTEDSYLQYLDLVATAIAADIVPITGEN
RILAFYGIKKVNENPSTGIQALLDLAKKTQGDMDITGLVFIIAPRINAAGRMDDAKKAVQ
LFIEKDYEKAVQYAEILHSDNDDRREADASITEEALKLLEEDANAMNKKTTVLFQSHWHK
GVVGIVASRLIETYYRPTIVLTQTENIVGGSARSVPGFNLYEAVHACRKHLLGYGGHFAA
AGMTLLPENVEAFAQEFELVVANSITPELLTPEINIDTEIKFSDITFSFYNIIQQMSPFG
PDNMLPTFVSRNVEDSGGSKIVKEKHIRFVLKQGSFQFSGIGFNLAEKFDIILTHKKIDV
VYKIDINEWQGNKTLQLRIIDFKASENS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgctggaacatactgccaattgatgaggtccatgaacgtgctttgcatgca
gtgcttaaaataaatactgctctgtgcagaattttagttcaacgtggatttaacacattt
gaaaaagcgaaaaatttttttcgccctgagctgaagagcttgcatagtccttggctaatg
aaagatatggataaggcagtagctcgtattcttcaagcatttgcaaaggaagaaagaatt
atggtttatggcgattatgatgtagatggcactacatctgtggcagctatgtatagtttt
ttatcgacaatctatccgaaagtagagttttatattccacatcgttataaagaaggttat
ggtatctcaaagataggcattgactttgccaaagaaaatgacattactttaatcgtttca
ttagattgtggtattaaagcggtagacctggtcgcatatgccaaaacattaggcatagat
ttcattgtctgtgatcatcatttacctgatgcagaagtcccggatgcgattgctatttta
aatgcaaaacagaaagattgtaactatccttataaagaattgtgtggttgtggtgtaggt
ttcaagctgatgcaagctttagccgaaaaactaaatttaacggaagattcctatttgcaa
tatcttgatttagtagctacggccattgcggcggatattgttcctatcacgggagaaaat
agaatacttgccttttatggtataaaaaaagtgaatgaaaatccatctacaggcatccaa
gctttgctggatttagcaaagaaaacacaaggagatatggatattaccgggctggtattt
atcatagcaccacgcattaatgcggcaggaagaatggatgatgctaagaaagccgtgcaa
ctgtttatcgaaaaagattacgagaaagctgtccaatatgctgaaatattgcattctgat
aatgatgatagaagagaagccgatgcctctattaccgaagaagctctgaaattgttagaa
gaggatgcaaatgccatgaataaaaaaacgacggtattgtttcaaagccactggcacaaa
ggtgtggtgggaattgtcgcttcacggttaattgaaacttattatcggccaacaatagta
ttaacccagacagaaaatattgtcggtggtagtgctcgtagtgtacctggtttcaatttg
tatgaagccgtacatgcttgtcgaaagcatttgctgggttatggaggtcactttgctgca
gcaggaatgactttgcttccggaaaatgtggaggcttttgctcaggagtttgaattagtt
gtagcaaattctattactccggagctgcttactccagaaataaatattgatacggaaata
aagttttcagatattactttttcattttataatattattcaacaaatgtcaccatttggt
ccggataatatgctcccaacttttgtttcacgtaatgtagaagattcaggcggcagcaaa
attgtaaaagaaaaacatattcggtttgttttaaaacagggtagtttccaattttcagga
attgggtttaatttggccgaaaagtttgatattattctgacacacaaaaaaatagatgtc
gtatataaaattgatatcaacgagtggcaaggtaataaaaccctccaattacgtattatt
gattttaaagcgagcgaaaattcgtaa
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