Arachidicoccus soli: D6B99_02660
Help
Entry
D6B99_02660 CDS
T05648
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ark
Arachidicoccus soli
Pathway
ark03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ark00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D6B99_02660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ark03019
]
D6B99_02660
Enzymes [BR:
ark01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D6B99_02660
Messenger RNA biogenesis [BR:
ark03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D6B99_02660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SBF_like
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AYD46614
UniProt:
A0A386HMP7
LinkDB
All DBs
Position
complement(580154..581407)
Genome browser
AA seq
417 aa
AA seq
DB search
MAFKNLSIIDPILKALEAEGYSSPTPIQSQAIPLVLERKDVLGCAQTGTGKTAAFAIPIL
QILYTAKRAVQGIKVLILTPTRELAIQIDESFASYGRYTGISHTVIFGGVSQLHQTNKLK
NGVDVLIATPGRLLDLMGQGFINLKHLEIFVLDEADRMLDMGFIHDVKKVILKLPANRQT
LFFSATMPPEIQKLADALLSNPAQVAVTPPSSTVDKIEQSLYYTNKADKPKLLLHLLKKY
SIETALVFARTKHGADKVVKILHQANIKAAAIHGNKSQNNRQNALKGFKSGEINVLVATD
IAARGIDIDDLKYVFNYDLPNVRETYVHRIGRTGRAGNAGTAISFCDLEERTELKDIQKL
ISKNIPVMEDHPYPIAAGTLAQKILPKQAQTSFKKQRPNNNNNRGGKPSNRNTKLAR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaaaaacttatcgattatcgatcctatcctcaaagcattagaagcagaagga
tacagcagccctacacctattcagtctcaagccattcctttagtattggaaagaaaagat
gtattgggatgtgctcaaacaggaacaggaaaaacagcagcttttgctattcctatctta
caaattctttatacagccaaaagagctgtgcaaggaataaaagttttgatacttacacct
accagagaattagctattcaaatagatgaaagtttcgcttcctatgggaggtacacaggc
atttctcataccgtaatctttggcggggtttcacagttgcaccaaaccaataaacttaaa
aatggagtagatgtattaattgcaacacctggcagattattagacctcatggggcaaggt
tttataaacttaaaacatctagaaatctttgtacttgacgaagcagatcgcatgttggat
atgggtttcatacatgatgtaaaaaaagttattttaaaacttccagccaacagacaaaca
cttttcttctctgcgactatgccgccagaaattcaaaagcttgcagatgccttgctatca
aatccggctcaagtagctgtaacgcctccttcttctactgtcgataaaatagaacaaagc
ctttattataccaacaaagcggacaaaccaaaattgttattgcatctattaaaaaaatat
tccatagaaaccgctctcgtatttgcacgaaccaaacatggtgctgacaaggtggtcaaa
atattacatcaagcaaatataaaagcagcggcaattcatggaaataaaagtcagaacaat
cgccagaatgctttgaaaggttttaaaagtggcgaaataaacgttttagtcgctacagat
attgcggctaggggcatcgacatagatgatttaaaatatgtatttaattatgacttgcca
aatgttcgggaaacttatgtacatcgcatcggacgtacgggtagagccggaaatgcaggt
actgcaatttctttttgtgacttggaagaaagaacagaactaaaagatattcaaaaatta
atcagcaaaaatattcctgtaatggaggatcacccctatcctattgcagcaggtacattg
gcacaaaagatattaccgaagcaggcgcaaacaagttttaaaaaacaaagacccaacaac
aataataatagaggtggaaaaccttcaaatagaaatactaaactagctagatag
DBGET
integrated database retrieval system
