Arachidicoccus soli: D6B99_08250
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Entry
D6B99_08250 CDS
T05648
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ark
Arachidicoccus soli
Pathway
ark02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ark00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D6B99_08250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ark03021
]
D6B99_08250
Transcription machinery [BR:
ark03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D6B99_08250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
UPF0122
Sigma70_r4
HTH_WhiA
Sigma70_ECF
HTH_24
HTH_11
CSTF_C
Motif
Other DBs
NCBI-ProteinID:
AYD47597
UniProt:
A0A386HNV5
LinkDB
All DBs
Position
complement(1883861..1884502)
Genome browser
AA seq
213 aa
AA seq
DB search
MPSDDHLHYSSKNAHNILLPEEECTLLEEVAQGSVQAYTRLYNLYLPTVHQYIAKFLNFH
IPDIEEIAQDIFLKIWKRRESLIAIRSFEKFLYVVSRNTLTDFYRVKKNLKLKQKDDELI
ELPNYPTDEKLITDEYFALAKEALNLLPEKRRKVFELRTQYDFSLEEIAQETHLSVSGVH
QNLQKATSFVQAYLKKHGLEVTKLLVYILLTIH
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgacgaccaccttcattattcttcaaaaaatgcacacaatattctcctacca
gaagaggaatgtacattattggaagaagttgcacagggttcagtgcaggcttataccaga
ctatataatttatatttacctacagttcatcaatacattgctaaatttttaaacttccat
attcctgatattgaagaaatagcacaggatatatttttaaagatttggaaaagacgagag
tctctaattgctattcgttcttttgaaaaatttctatatgtagtgtctcgaaataccctc
acagacttctaccgagtgaaaaagaaccttaagctaaagcaaaaagatgatgaattgatt
gagttgcctaattatcctacggatgagaaattaattacagatgaatattttgcgctagca
aaagaggccctgaatcttttacctgaaaaaagaagaaaagtttttgaattaagaacacaa
tatgatttttctttagaagaaattgcacaggagacccacctctctgtttcgggagtccat
caaaacttacaaaaggcaacttcatttgttcaggcctatctaaaaaaacacggtttagag
gttacaaaactgcttgtttacattttattaaccattcattaa
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