KEGG   Arachidicoccus soli: D6B99_08250
Entry
D6B99_08250       CDS       T05648                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ark  Arachidicoccus soli
Pathway
ark02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ark00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    D6B99_08250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ark03021]
    D6B99_08250
Transcription machinery [BR:ark03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D6B99_08250
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 UPF0122 Sigma70_r4 HTH_WhiA Sigma70_ECF HTH_24 HTH_11 CSTF_C
Other DBs
NCBI-ProteinID: AYD47597
UniProt: A0A386HNV5
LinkDB
Position
complement(1883861..1884502)
AA seq 213 aa
MPSDDHLHYSSKNAHNILLPEEECTLLEEVAQGSVQAYTRLYNLYLPTVHQYIAKFLNFH
IPDIEEIAQDIFLKIWKRRESLIAIRSFEKFLYVVSRNTLTDFYRVKKNLKLKQKDDELI
ELPNYPTDEKLITDEYFALAKEALNLLPEKRRKVFELRTQYDFSLEEIAQETHLSVSGVH
QNLQKATSFVQAYLKKHGLEVTKLLVYILLTIH
NT seq 642 nt   +upstreamnt  +downstreamnt
atgccatctgacgaccaccttcattattcttcaaaaaatgcacacaatattctcctacca
gaagaggaatgtacattattggaagaagttgcacagggttcagtgcaggcttataccaga
ctatataatttatatttacctacagttcatcaatacattgctaaatttttaaacttccat
attcctgatattgaagaaatagcacaggatatatttttaaagatttggaaaagacgagag
tctctaattgctattcgttcttttgaaaaatttctatatgtagtgtctcgaaataccctc
acagacttctaccgagtgaaaaagaaccttaagctaaagcaaaaagatgatgaattgatt
gagttgcctaattatcctacggatgagaaattaattacagatgaatattttgcgctagca
aaagaggccctgaatcttttacctgaaaaaagaagaaaagtttttgaattaagaacacaa
tatgatttttctttagaagaaattgcacaggagacccacctctctgtttcgggagtccat
caaaacttacaaaaggcaacttcatttgttcaggcctatctaaaaaaacacggtttagag
gttacaaaactgcttgtttacattttattaaccattcattaa

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