Arachidicoccus soli: D6B99_09990
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Entry
D6B99_09990 CDS
T05648
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ark
Arachidicoccus soli
Pathway
ark03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ark00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D6B99_09990 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ark03019
]
D6B99_09990 (recQ)
03400 DNA repair and recombination proteins [BR:
ark03400
]
D6B99_09990 (recQ)
Enzymes [BR:
ark01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D6B99_09990 (recQ)
Messenger RNA biogenesis [BR:
ark03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D6B99_09990 (recQ)
DNA repair and recombination proteins [BR:
ark03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D6B99_09990 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ-1-like_HTH
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AYD47890
UniProt:
A0A386HQW5
LinkDB
All DBs
Position
complement(2353243..2355504)
Genome browser
AA seq
753 aa
AA seq
DB search
MAKSIKKAAVKAVKPAAIKKHNHQHDITSNLQAKFGFDKFKGRQEDAIHSLLNGQDTFVI
MPTGGGKSLCYQLPAMILDGCAIVVSPLIALMKNQVDLVRGYSENDNIAHFLNSSLNKGQ
IKVVRDDMVSGKTKLLYVAPETLTKQENIDFLKSLKLSFFAVDEAHCISEWGHDFRPEYR
RLREMMNEINIDIPVIALTATATPKVQSDIVKNLGLRNPNIFISSFNRKNLYYEIQPKVK
IDQTIKSIVKFISQNKGKSGIIYTLNRKTTEELADILMANNIKAVAYHAGLDAKLRASRQ
DQFLNEDVQVIVATIAFGMGIDKPDIRFVIHYNVPKSIENYYQETGRAGRDGLEGKCILY
YSHKDVSKLEHLMRDKPLSEREVGAQLINETLSFVEASVCRRKVLMHYFGEEWHEENCGS
CDNCLHPKEKIEAKEEVVKVLKVVKALDERFNLEYAINILSGKLTPTVTMYRHEQLPVFG
IGKEKDNHFWNSLIRQMLLENLIRKDIEEYGLLKFTPTGEKFLKKPTSFKIVLNNLFEDA
VADDEESEGANSTAGATDTVLFEMLKDIRQKEAKKKNLPPFVIFLESSLNDMATLYPTTV
AELDKCQGVSKGKAIKYGKPFVDVIAKYVEENEVVKPDDFVMKSVVNKSNNKIYIIQNVD
KKIPLETIAKNKDLRLDALLEEMETIVASGTKLNLNYAIGDMLDEDEQEEIIDYFRGCET
SSLDVAQEELADSDYNWEQLKIMRIKFLCEYGN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagtattaaaaaagcagcagtaaaagcagtaaaacctgctgcgatcaaaaaa
cataatcatcaacatgatattacttcgaatttgcaggcgaaatttggttttgataaattt
aaaggaaggcaggaagacgctattcatagccttttaaatgggcaagatacttttgtaata
atgcctactggtggtggaaagagcctatgttatcaattgcctgctatgatcttagatggt
tgcgctattgtcgtgagtccgcttattgcccttatgaaaaatcaagtagatttggtgaga
ggttatagtgaaaatgataatattgcccactttttaaactcttctttaaacaaggggcaa
ataaaggttgtacgggatgatatggtgtcaggcaaaaccaaattattgtatgtagctccg
gaaaccttgacaaaacaagaaaatatagactttttaaaatctttaaaactttcttttttt
gctgtagatgaagctcattgtatttcagagtgggggcatgattttcgccctgaatatcgt
cgtttgagagagatgatgaatgagataaatattgacattccggttattgctttaaccgca
accgcaacgccaaaggtgcagagtgatattgtaaaaaacctgggattacgcaatcccaac
atttttatctcttcttttaatagaaaaaacctttattacgaaattcaacccaaggtaaaa
attgatcaaacgattaaaagtatcgttaagttcatttctcaaaacaaaggcaaaagcggt
attatttatactttaaacagaaaaacgacagaagaattggcggatattctcatggccaat
aatattaaagctgttgcttatcatgccggactggatgcaaaattgcgcgcttccaggcaa
gaccagtttttaaatgaagacgtacaggtgatagtcgctaccattgcatttgggatgggt
attgataagccggacatccgtttcgttattcattataatgtaccaaaatcaattgaaaat
tattatcaggaaacaggccgtgctggccgtgatggcctagagggtaaatgcatcttgtat
tattcacacaaagatgtttctaagctggagcatttaatgcgtgacaaacccttgagtgaa
cgagaagtgggtgctcaattgattaatgagacactttcttttgtagaagcttctgtttgc
cgtagaaaagtcttgatgcattattttggagaggaatggcatgaggaaaattgtggaagc
tgtgataactgccttcatccgaaagagaaaattgaagcgaaagaagaggtcgtaaaagtt
ctaaaggtcgtgaaagctttggacgaacgttttaatctggaatatgcaattaatattcta
agtggaaaactgaccccaacagttacgatgtaccggcacgagcaattgcccgtatttggc
attggtaaagaaaaagataatcatttctggaacagtctgattagacaaatgctattggag
aatttgattagaaaagatattgaagagtatggattactaaaatttacaccaactggtgag
aaattcttaaagaagcctacttcttttaaaattgtattaaataatttatttgaagatgct
gttgctgatgatgaagaatctgaaggtgcgaatagtacggccggcgctacagatactgtt
ttgtttgagatgctgaaagatattcgacaaaaagaagcgaagaaaaagaacttgccgcca
tttgtcatattcttagaatcttcattgaatgatatggcaacattatatcccacaacagtt
gccgaattggataaatgccaaggagtgagtaaaggtaaagccattaaatacgggaaacct
tttgtagatgttatcgcaaaatatgtagaggaaaatgaggtcgtaaagccggatgatttt
gtgatgaagagcgtcgttaataaaagcaataataaaatctatatcattcagaatgtagat
aagaagattcctttggaaaccattgctaaaaataaagatttgcgcctggatgcgttgttg
gaagagatggaaactattgtggccagcggtacgaaactcaatctaaactacgcaataggc
gatatgcttgatgaggatgaacaggaggaaattattgattatttccgtggttgtgagact
tcttctttggatgttgcacaagaagaactggctgatagcgattataattgggaacagctg
aaaattatgcgtatcaagtttttatgcgagtatggtaattaa
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