Arachidicoccus soli: D6B99_12205
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Entry
D6B99_12205 CDS
T05648
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ark
Arachidicoccus soli
Brite
KEGG Orthology (KO) [BR:
ark00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
D6B99_12205
Enzymes [BR:
ark01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
D6B99_12205
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
PQQ
PQQ_2
Kre9_KNH
Motif
Other DBs
NCBI-ProteinID:
AYD49424
UniProt:
A0A386HV65
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All DBs
Position
complement(2896570..2898426)
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AA seq
618 aa
AA seq
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MFCGGLLFFINHTNAQREMESLTRGIIAMNQGNGKVFVSWRLFGTDPQNIAFNLYRKSGN
KSPVKLNAKPILTSTNYVDSHVDSAVQNIYFVRAVLNGKEESNSTSYILKANTPVQQYLN
VSLRTPPGYTPNDISVGDLDGDGQYDLIVHMTGRGRDNSQNGMTDPPIFDAYKLDGTFLW
RINLGRNIREGAHYTQFMVYDLDGDGKAEFACKTADGTIDGQGHVIGDSSKHYVDKNGRI
LHGPEYLTIFNGETGAAMETVPYDPPRGDIGKWGGKGGNGGNDHYGNRANRFLACIAYLD
GVHPSLVMCRGYYGRIVLVAWDWRNHQLTKRWVFDTKDGSNAFSGQGNHNLAVADVDGDG
KDEIVYGSMCVDDNGKGLYTTGLRHGDAVHLSDLDPSRPGMEVYGIHEIEDKTTGPGVAM
YDARTGKILWTSDINKDVGRGMAADIDPRYLGTETWGGSEGLKDVKGNYIGKAPRSDNFG
IWWDGDLLRELLDRNRITKWDWKNSREVPLLTAEECLSNNGTKATPGLSADLFGDWREEV
IWRTKDNKALHIYTTTIPTNYRFYTLMQNPEYRLSIAWQNVGYNQPPYTDYYLGVGMKQP
PKPNIILTPLSIHLKSEN
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtgggggccttctattttttattaaccatacaaatgcgcaaagagagatggaa
agccttacgcgtggcatcattgcaatgaatcagggaaatggaaaggtctttgtaagttgg
cggttattcggaacagacccacaaaatattgccttcaatctttatagaaaatcgggtaat
aaatcacctgtaaaattaaacgcaaagccaatattgacttctacgaattatgttgatagc
catgtagatagtgctgtacaaaacatttatttcgttcgtgctgttttaaatggcaaagag
gagagcaatagtacttcctatattctaaaggccaatacgccggttcagcaatacctgaat
gtttcactaagaacacccccaggctatacacccaatgatatttctgtgggagatttagat
ggggatggacaatacgatttgattgtgcacatgacaggaagaggaagagataattctcaa
aatggaatgacagacccgcccatatttgatgcgtataaattggatggtacttttttgtgg
cggataaacttagggcgcaatattcgtgaaggagcgcactatacgcagttcatggtttat
gatttagatggtgacggtaaagccgaatttgcttgcaaaacggctgatggtaccattgat
ggacagggtcatgtaattggagactcctccaagcactatgtagataaaaatggaagaata
ttgcatggacctgaatacttaaccattttcaacggagaaacgggagctgcaatggagact
gtgccttacgatccgccaagaggtgacattggcaaatggggcggcaaagggggtaatggg
ggcaacgatcattatggaaacagagcaaacaggtttttggcatgtattgcttatctggat
ggtgtccatccaagtttggtgatgtgtagaggttattatggcagaattgtgttggtggcc
tgggactggagaaaccatcaattaaccaaacgctgggtttttgatacgaaagatggttcc
aacgctttctccggtcaaggcaatcataatctggctgttgcagatgtagatggtgatgga
aaagatgaaatagtctatggctctatgtgtgtggatgataatggcaaaggcttatatacc
acgggtttgagacatggcgatgctgtgcatttgagtgatttagatccgtcaaggcccgga
atggaagtttatggtattcatgagattgaagataaaactaccgggccaggcgttgccatg
tatgatgcgagaacgggtaagatactttggacaagcgatatcaataaagatgtaggtaga
ggcatggctgctgatatagatccgagatatctaggtactgaaacctggggcggttctgaa
ggactgaaagatgtgaagggtaattatattggcaaggcgccaaggtccgataatttcggt
atttggtgggatggagatttactaagagagctcttagatagaaacagaattacaaaatgg
gattggaaaaatagtagagaagttcctttgctaactgcagaggaatgcctctcaaataac
gggacaaaagcaacccctggactaagtgcagatctttttggcgactggagagaagaagtt
atttggcgaactaaagataataaggcattgcatatttacacaacgacgataccgacaaat
tatcgcttttatactttgatgcaaaacccagaatatcgcttgagtatagcctggcaaaat
gtaggctacaatcaaccgccttatactgattattatctgggtgtgggtatgaagcaacct
cccaagccaaacatcattttaacgccactctccatacacttgaaaagcgagaattag
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