Arachidicoccus soli: D6B99_12595
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Entry
D6B99_12595 CDS
T05648
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ark
Arachidicoccus soli
Pathway
ark03030
DNA replication
ark03430
Mismatch repair
ark03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ark00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D6B99_12595
03430 Mismatch repair
D6B99_12595
03440 Homologous recombination
D6B99_12595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ark03032
]
D6B99_12595
03400 DNA repair and recombination proteins [BR:
ark03400
]
D6B99_12595
Enzymes [BR:
ark01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D6B99_12595
DNA replication proteins [BR:
ark03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D6B99_12595
DNA repair and recombination proteins [BR:
ark03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D6B99_12595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
AYD48365
UniProt:
A0A386HR93
LinkDB
All DBs
Position
complement(2987242..2990919)
Genome browser
AA seq
1225 aa
AA seq
DB search
MPQFSHLHVHSQYSLLDGAASIKNLYKKAESDGMQSLALTDHGNMFGAFEFVAQAWKNTK
VIGKDANGKDILAPKIKPIVGCELYVVEDRFQRSFSKEKKDKRYHQILLAKNESGYRNLI
KLTSLGYIEGLYGKYPRVDKALILQYHEGLIATTCCLGASVPQAILTKGEEEAETEFKWW
LDLFGDDYYVELQRHNLPEQDKVNEVLLRLAKKYNVPIICTNDSHYMDQEDANAHDILLC
VNTGEKQATPGFDDFVNDDIQIKNRRFKFPNDQFYFKTTKEMEQVFKDIPQSLENTQMIV
DKVEVLNLKKDILLPAFPIPQEFKTTADDNVNQWNFLHHLTYEGARKRYGEMTAEVTERI
DFELFTIKTMGFAGYFLIVSDFIKAGRDMGVFIGPGRGSAAGSVVAYCIGITNIDPIKYN
LLFERFLNPDRKSMPDIDTDFDDEGRQRVIDYVVQKYSKQQVAQIVTYGTMAAKSSIKDV
ARVMDLPLAESNMLTKLVPDKPGTQLARVLKAPITNKESKGGESSLEEKEQYQPEDIENI
KKLREIYEGDDMRAAVLHEAEKLEGSVRNTGVHAAGIIIAPKDLTELIPVATAKDSDLWV
TQIEGGSIEEAGVIKMDFLGLKNLSILKTALGLIKLNHGIEINLDELPLDDEATFQLYQR
GETNATFQFESAGMQKHLRDLKPDVFADLIAMNALYRPGPIAYIPTFIKRKHGVEPIEYD
LPEMEEYLADTYGITVYQEQVMLLSQKIAGFSKGDADVLRKAMGKKQIAVLNKMKTQFVE
GATKKGHPADKLDKIWNDWEAFAQYAFNKSHSTCYAFVAYQTGYLKAHYPSEYMAAVLNH
AGAIDKITFYMEECRRMGINVLGCDINESQKGFAPNRKGEIRFGFGGVKGVGDAAIDSIL
EEREKNGIFKDIFDFIKRVNQRTVNKKSLESLVYAGAFDCFDAMHRAQFFAVQPGETVNN
LERIIKFGNVYQTGAQSTANSLFGDLGMPEVATPKIAPSETWGLVEKLNFEKEVTGIYIS
GHPLDHYKFELEHYGIMPLSNFNELKDNTETPPNTGVNYRLAGLVTEAAHRLTKTGREFG
IITMEDFTGKTEIALWRDDYVKFKSYIDKGLSIVVNGFFDKRYNGETFDFKVSSILLLET
LKTSYTKALELELPLKSINENAVDFFRDNMKKNPGSTTLKFKVVDVDEEMLVNLYTLDKG
FIMNEELIEFLNKNQDIHVQVGLTG
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaattttcgcatttacacgttcactcccaatactccttattagacggagcagct
tccattaaaaatctttataagaaggcggaaagtgatggaatgcaatcattagcgcttacc
gatcacggtaatatgtttggtgcttttgaatttgtagcacaagcttggaaaaatacgaaa
gtaataggcaaagatgcaaatggtaaagatatccttgcgccgaagataaagccaattgtt
ggttgcgaattatatgtggtagaagaccgctttcaaagaagtttctcgaaagaaaaaaaa
gacaaacgctatcatcagattttactggctaaaaatgaatcgggctatcgaaacttgata
aaacttacctcccttggttatattgaggggttgtatggtaaatatccacgtgtagataag
gctttgattttgcaatatcatgagggcctgattgcaactacttgttgtttgggggcttct
gtacctcaggctatattaacgaagggtgaggaagaggcagaaactgaatttaagtggtgg
cttgatttgtttggcgatgattattatgtagaattacagcgacataatttgcctgaacaa
gataaagtgaatgaagtgcttctgcgtttggcaaaaaaatataatgtgcctattatttgt
accaatgatagtcattatatggatcaggaagatgcgaatgcgcacgatattttactctgt
gtaaatacgggggaaaaacaggctactccgggttttgatgactttgtgaatgatgatata
caaataaaaaaccgtcgatttaagtttcccaatgaccagttctattttaagacaaccaaa
gaaatggaacaggtgtttaaagatattccgcagtctctggaaaatacacaaatgattgtg
gacaaagtagaggttctaaatctaaagaaagatattttattgcctgcatttcctattcca
caggaatttaaaacaacggctgacgataatgttaatcaatggaattttcttcatcatctt
acctatgaaggtgctagaaaacgctatggagaaatgacagcggaagttacggaacgcatc
gactttgaattgtttacgattaaaacaatgggattcgcaggatattttttgattgtaagt
gattttattaaagcaggacgcgatatgggcgttttcattggtcctggtcgtggttccgct
gcaggaagtgtggtggcttattgcataggtattaccaatattgatccgataaaatataat
ttactttttgaaagatttttaaatccggatagaaaatcaatgccggatatcgatacggat
tttgatgatgaaggaaggcagagagttattgattatgtagtgcagaaatactctaaacaa
caagtggcacaaatcgttacctatggcacgatggctgccaaatcttccattaaggatgta
gcacgtgtgatggatttgccacttgcggaatctaatatgctcactaaattagttcctgat
aaaccggggacacaattggcgcgtgtattgaaagcaccgattacaaataaagaatcgaaa
ggcggtgaaagctcattagaagaaaaggaacaataccaacctgaagatattgaaaatata
aaaaaacttcgtgaaatatacgagggagatgatatgcgtgcagctgtcttgcacgaagct
gaaaaactggaaggtagtgtgcgtaatacaggtgtacatgctgccggtatcattatcgca
ccaaaagatctgaccgagttaattccggtggctaccgctaaagactctgatttatgggta
acacaaattgaaggcggaagtattgaagaagcgggtgttattaaaatggactttttagga
ttgaaaaatttgtccatccttaagactgcattgggactgataaaactaaatcatggtatc
gaaattaatttggatgagttacccctggatgatgaagcaacttttcaattgtatcaaaga
ggtgaaacgaatgccactttccaatttgaaagtgcgggaatgcaaaaacatctgcgcgat
ttaaagcctgacgtattcgcagatttaatcgcgatgaatgccttgtatcgaccgggacca
atcgcatacataccaacttttattaaaagaaaacatggtgtagaacctatcgaatatgat
ttgccggaaatggaagaatatcttgcagatacttatgggattacggtttatcaggaacag
gtgatgttgctttctcaaaaaatagcgggcttttccaaaggagatgctgatgtgttgcgt
aaggcaatgggtaagaaacaaattgcggtgctaaataaaatgaaaacgcaatttgtggaa
ggtgctacaaaaaaaggacaccctgcggataagctggataaaatatggaatgactgggaa
gcttttgcacaatatgccttcaataagtcgcattctacttgttatgcatttgttgcctac
caaacaggctatctaaaagcgcattacccaagtgaatatatggctgcagttttgaatcat
gcgggtgctattgataagattacgttctacatggaagaatgtagacgtatgggaatcaat
gtattaggctgcgatattaatgaatcacaaaaagggtttgcgcctaatagaaaaggagaa
atacgttttggttttggcggggtaaaaggtgttggcgatgcggctatcgacagtattttg
gaagaaagagaaaagaatggcatattcaaagatatttttgattttattaaaagggtaaac
cagagaacagtaaataaaaaatcattagaaagccttgtttatgccggcgcatttgattgt
tttgatgctatgcaccgtgcgcagttttttgctgtgcaacccggagaaacggtaaacaat
ctggaacgaataataaagtttggtaatgtttatcaaaccggcgcccaaagtactgccaat
agcctttttggagacctaggtatgcctgaagttgcaacgcctaaaatagcgccttctgag
acttgggggttggtagagaagttgaattttgaaaaagaagttacaggcatttatatcagc
gggcatccattagatcattacaaatttgaattagaacattacggtataatgcccctgagt
aattttaacgaattaaaggataatacagaaacaccgcctaatacaggcgttaattatcgc
cttgcgggattggtgacagaagcggcgcatcgtttaacaaaaacaggaagagaattcggg
attataacaatggaggattttaccggaaaaacagaaattgctttatggcgtgatgactat
gtgaagtttaaaagttatatcgataaggggttatcgattgtggtaaatggcttttttgac
aaacgttataatggcgaaacttttgattttaaagtatcttctattcttttgttagagacc
ctgaagacctcttataccaaggctttggaattagaattgcctttgaaatctattaatgaa
aacgccgtagacttttttcgggataatatgaaaaaaaatccgggctcgactacactgaaa
tttaaggtggtagatgtggatgaagaaatgttggtgaatttatacaccctggataaggga
tttattatgaatgaagagttgattgaatttttaaataaaaatcaagatattcatgtgcag
gttgggttgacagggtag
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