Arachidicoccus soli: D6B99_13970
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Entry
D6B99_13970 CDS
T05648
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ark
Arachidicoccus soli
Pathway
ark03420
Nucleotide excision repair
ark03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ark00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D6B99_13970
03430 Mismatch repair
D6B99_13970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ark03400
]
D6B99_13970
Enzymes [BR:
ark01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D6B99_13970
DNA repair and recombination proteins [BR:
ark03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D6B99_13970
MMR (mismatch excision repair)
Other MMR factors
D6B99_13970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DUF3799
Dna2
AAA_30
AAA_11
IL17R_fnIII_D2
Motif
Other DBs
NCBI-ProteinID:
AYD48612
UniProt:
A0A386HSD7
LinkDB
All DBs
Position
complement(3324656..3327910)
Genome browser
AA seq
1084 aa
AA seq
DB search
MALWKLKFLHRPLFPVNKEILILIYNIQNFHALSNKEQLEKFQQVYKSLNEKQKEAVDTI
DGPVMVIAGPGTGKTQILSARIGNILLKTDTLPENILCLTYTDAGVVAMRSRLKSFIGAD
AYKVNIYTFHAFCNDIIQANLSYFEKNSLDAISDLESIDLFKELINGFKKDNPLKRYRGD
VYYDIPNLRSLFSTMKREGWKPGFIEEKIDEFIEQVRNCDENSEYYADYKYKKKYKNKSA
GDLKPAFEDLLDRMEKLRAAVNQFDNYQSLMRHNNRYDFDDMINWVLKAFEENPLLLNTY
QEQYLYILVDEYQDTSGTQNALVHLLMNYWEKPNVFVVGDDDQSIYRFQGANLDNMVDFA
NGLSRDLKTIVLTKNYRSVQPILDHSKTIIEKNKERLVNQLPGLSKDLVSSNEKIKELKI
QPVLLEYVTQREEMIGITLSVEKLIQQGVQPGKIAVIYKEHKYGEELAKYFQLKNISYYS
KRSENVFTTTFGKKLLLILNYLHAEHDAPYGGDEMLFEILHFDWFGIPAIEVAKLSIEVS
RSQFKEDKTSIRQLLFEKVNAPAQELFSPSIPEGFRMASNAIESLITDVPNENLQRLFEN
IIFKMGLITYIMNSPEKFKLLKILTALFDFIKDETARNPYLSLELLIGNIDLMKEEKLPI
PIIEINGTDKGVNLLTAHGSKGLEFQYVYFAGCISGSWEKKRGNMGGFSFPDTLFFSVAK
EKVLEELRRLFYVAMTRAEQYLFISYYKFDNKNKELEPTQFIAEIEEGQVFQPEHCEISQ
EDKVDFQLMEFTNNRAPELQKMESDLLDAVLDNFVMSVTALNNFLKCPLSFYFNQLLRIP
AAKNEALVFGTAVHFALEKLFTRMNNNEHVFPSKEIFIEDFEWSMKRNRENFVAESFNRR
MEYGHEILHNYYQKYIENWSKIVVVERMIKNVVVSGVPIKGKLDKLEFDGKQVNVVDYKT
GKFDNAKDKLKAPNDKNPLGGDYWRQAVFYKILLDNYPLKDWQVISTEFDFVEPDDKKEY
HKTKLTISPGEVETVKQQMQDVWHKIQSRDFYTGCGKEDCHYCNFVKDNNLYVELHNLNE
EEGF
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgtggaaattgaaatttctccatcggccgttatttccagtgaacaaagaaatt
ctaattttaatttacaacattcaaaattttcacgctttgagcaataaagaacaactcgaa
aaatttcaacaagtttacaagtctttaaacgaaaaacaaaaagaagccgttgatactatc
gatgggccagtgatggtaattgctgggccaggcacaggcaaaacacaaattctatcggca
cgtatcgggaatattttattgaagaccgataccttgcccgaaaatattctctgccttact
tatactgacgcaggtgtggtagccatgcgtagccgactaaaatcctttattggtgcggat
gcgtacaaagtaaatatttatactttccatgctttttgcaacgatattattcaagccaat
ctttcttatttcgaaaaaaactctttagatgctatttctgatttagaaagtattgatttg
tttaaagaattgattaatggattcaaaaaggacaaccctcttaagcgttatcgcggcgat
gtgtattatgatattccgaatttacgctccctgtttagtacaatgaaacgtgaaggttgg
aagcccggttttatagaagaaaaaatagatgagtttatagaacaagtgcgtaattgtgat
gaaaactcagaatactatgccgattataaatacaagaaaaaatacaagaataaaagcgca
ggagacttaaaacctgcatttgaagatttgctggatcgcatggagaaattacgtgctgcc
gtgaatcagtttgataattatcagtctttaatgcgccataataatcggtacgattttgat
gatatgattaattgggtgctaaaggcttttgaagaaaaccctttattactcaatacttat
caggaacagtatttatatatattggtagatgaatatcaagatacaagtgggacacaaaac
gcgctggtgcatttgttgatgaattattgggaaaagccgaatgtatttgtagtgggcgat
gacgatcaaagcatctatcgttttcaaggcgctaacttggataatatggttgactttgcg
aatggactttccagagatctaaaaacgattgtacttaccaaaaattatcgttccgttcaa
cctattttagatcattctaaaacaataattgaaaaaaataaagaacgtttggtaaatcaa
ctccccggtttgagtaaggacttagtttcttcaaatgaaaaaattaaagaattaaaaatt
caaccagttttattggaatatgttacacaaagagaggaaatgataggtattactttaagt
gtcgaaaagctgatacaacagggtgtacagccgggtaaaattgctgtaatttataaagaa
cataaatatggcgaggagctggctaaatattttcaattaaaaaatatttcttactacagc
aagcgcagtgaaaatgtttttacaacaacttttggtaagaaattgttgctgattttaaat
tatctccatgcagaacatgatgcgccttatggtggagatgaaatgctttttgagattttg
catttcgattggtttggaattcctgcaatagaagtagcgaaactttctattgaagtaagt
agaagccagtttaaagaagataaaacctccattcgacaattgttgtttgaaaaagtaaac
gcacctgcacaagaattgttttcaccttcaattccagaggggtttagaatggcgagtaat
gccatcgaaagtttgattactgatgttcctaatgaaaatttacaaaggttatttgaaaat
atcattttcaaaatggggctgattacttatatcatgaacagccccgaaaagttcaaacta
ttgaaaatactcacggcgctttttgattttatcaaggacgaaacagcacgcaatccctat
ttgagtttggaactattaatcggtaatattgatttgatgaaggaggaaaaattgcctatt
cctatcattgaaataaatggaacggacaaaggtgtgaacctcctgacagctcatggatcc
aaagggttagagtttcagtatgtatatttcgccgggtgtatcagtgggagctgggaaaaa
aaacgaggtaatatgggtgggttttctttcccggataccttattcttttcggtagcaaaa
gaaaaagttttagaagaattacgacgacttttttatgtagcgatgacgcgcgctgagcaa
tatttatttatctcttattataaatttgataataaaaataaagaactagaacctacacaa
tttattgcagaaatagaggaaggacaggtatttcaaccggaacattgtgaaatatcgcag
gaagataaagtggattttcagttgatggaatttactaataatcgggcacctgaattacaa
aaaatggaatctgatttgttagatgcagtgttagataattttgtaatgagcgtaacggca
ttaaacaattttctaaagtgccccttgagtttttatttcaatcaattgttgcgtattcct
gcggctaaaaacgaagctttggtatttggtaccgccgtacattttgccttggaaaaatta
tttaccaggatgaataataatgagcatgtttttccttcgaaagaaatatttatcgaggat
tttgagtggagcatgaaacgcaacagagaaaattttgtggctgagagttttaacagacga
atggaatatggacacgaaatcttgcacaattattatcaaaaatatattgaaaattggagc
aaaattgtagtggtagaaaggatgattaaaaatgtggtggttagtggtgtgcctatcaaa
ggaaagttagataaactggaatttgacggaaaacaagtaaatgtagtagattataaaact
ggaaaatttgataacgctaaagataaattgaaagcacctaatgataagaatcctttaggt
ggcgattattggcgtcaagccgtcttttataaaattttgttggataattatcccctaaaa
gattggcaagttatcagcactgaatttgattttgtagaaccggatgataaaaaagaatat
cataaaacaaagttgacaatcagcccgggggaggtggaaacggtgaaacaacaaatgcaa
gacgtatggcataaaattcaaagtagagatttttacacaggttgtggtaaagaagattgt
cattattgcaattttgtaaaagataataatctatatgtggaattgcacaatttgaatgaa
gaagaggggttctga
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