Arthrobacter sp. 'calajunan' LS16: AFL94_04785
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Entry
AFL94_04785 CDS
T04078
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
arl
Arthrobacter sp. 'calajunan' LS16
Brite
KEGG Orthology (KO) [BR:
arl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
arl03016
]
AFL94_04785 (truB)
Enzymes [BR:
arl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AFL94_04785 (truB)
Transfer RNA biogenesis [BR:
arl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFL94_04785 (truB)
Prokaryotic type
AFL94_04785 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF2244
TolA_bind_tri
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ALD63358
LinkDB
All DBs
Position
1061712..1062566
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AA seq
284 aa
AA seq
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MTSHDVVGRIRRLAGTRKVGHAGTLDPMATGVLVIGVNKATRLLTYIVGHDKTYTATIRL
GQSTVTDDAEGDIVSERIAAAVTDEDIEREVAKLRGDIQQVPSQVSAIKVDGKRSYARVR
AGEQVELKSRPVTIKRFDIHEIRRENGGKILDVDVTVSCTSGTYIRALARDLGEALNVGG
HLTALRRTEVGPYKIELARTLEQLAQEFEILPLEKAAAAIFPNRTVSVDEAVELSFGRPI
AASSKTMDVAADQPVAAFAPNGVLVALLEDKGDKARTTLVFTAK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccacgatgtggttggtcgcatccgccggctggcgggcacccgcaaggtcggg
catgccggaacgctggatcccatggccactggcgtgctggtcatcggcgtcaacaaggct
acccgcctgctcacttacatcgtcggccacgacaagacctacaccgccaccattcgcctg
ggccagagcaccgttaccgacgacgccgagggcgatatcgtctccgagcgcatcgccgct
gcggtgaccgacgaggacatcgagcgcgaggtggccaagctgcgcggggacatccagcag
gtcccgagccaggtttctgcgatcaaggtcgacggcaagcgctcctatgcgcgcgttcgc
gccggcgagcaggtggaattgaagtcccgcccggtgacgatcaagcgcttcgacatccac
gagatccgccgcgagaatggcggcaagatcctggatgtggacgtcaccgtctcctgcact
tcgggtacctacatccgcgccctggcccgcgacctgggcgaagccttgaacgtcggcggc
cacctgaccgcgctgcgccgcaccgaagtcggcccgtacaagatcgagctggcccgcacc
ctagagcaactggcgcaggagttcgagatcctgcccctggaaaaggctgccgcggcgatc
ttcccgaaccgcaccgtgagcgtcgacgaagcagtcgagctgtccttcggccgccccatc
gctgcgtcatccaagaccatggacgtcgcggcagaccagcccgtggccgctttcgcgccc
aacggcgtgctggtcgcgctgctggaagacaagggcgacaaggcccgcaccacgctggtt
ttcaccgccaagtaa
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