Arthrobacter sp. 'calajunan' LS16: AFL94_06370
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Entry
AFL94_06370 CDS
T04078
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
arl
Arthrobacter sp. 'calajunan' LS16
Pathway
arl03030
DNA replication
arl03430
Mismatch repair
arl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFL94_06370
03430 Mismatch repair
AFL94_06370
03440 Homologous recombination
AFL94_06370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arl03032
]
AFL94_06370
03400 DNA repair and recombination proteins [BR:
arl03400
]
AFL94_06370
Enzymes [BR:
arl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFL94_06370
DNA replication proteins [BR:
arl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFL94_06370
DNA repair and recombination proteins [BR:
arl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFL94_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ALD63613
LinkDB
All DBs
Position
1400760..1401761
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AA seq
333 aa
AA seq
DB search
MALDFTAVDFETANGFIGSACSVGLVKVRSGRIVETEQWLMKPPAGFDHFDPRNVSIHHI
TADMVADAPRVDTKLPDLLDFVGSDVLVAHNSAFDSGVIRAASEASERPVPQIAHLCTVK
LSRKAYDLPSYSLPFVAEEAGHPIENHHEALADSVACAWAMIDMAERSGTSSVLQTADHY
RVGLGLTQAWNPGDALSRATRDAQGWLASGNPLPPQGEFGNWPQEGPNPQPNLDSDPSHP
LYGQVIVFTGNLSLPRPKAKEMAAEHGAQSASRVTRATTALVVGDGFVPQDLATGRLTNK
AKHVLRLREKGQRVSIISEGEFLQMVGGFGLTA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtggctttggacttcactgcagtagattttgagacagcaaacggatttatcggctcggcc
tgctcggtcggcctggtcaaggtacgctccgggcgcatcgttgaaaccgagcaatggctc
atgaagccgccggcagggttcgaccatttcgacccgcgcaacgtctccatccaccacatc
accgcagacatggtcgccgacgctccgcgcgtggatacgaagctgcccgacctgctggac
ttcgtcggctccgacgtgctcgtggcgcacaattccgccttcgactccggggtgatccgc
gcggcttccgaggccagcgagcgcccggtgccgcagatcgcgcacctgtgcaccgtcaag
ctctcccgcaaggcctacgacctgcccagctactcgctgccgttcgtggccgaggaagcc
ggccatcccatcgagaaccaccacgaggcgctcgccgactccgtggcctgcgcctgggcg
atgatcgacatggccgagcgcagcggcaccagctcggtgctgcagaccgccgaccactac
cgcgtggggcttggcctgacccaggcctggaacccgggcgacgcgctttcccgtgccacc
cgcgacgcgcagggctggcttgcctccggcaacccgctgcccccgcagggtgagttcggc
aactggccgcaggaaggccccaacccgcagccgaacctggattcggatcccagccacccg
ctctacggccaggtcatcgtgttcaccggcaacctgagcctgccgcggcccaaggccaag
gaaatggcggccgagcacggcgcccagtcggcatcccgcgtcacccgcgccaccaccgcg
ctggtggtcggcgacggcttcgtcccgcaggatctggccaccggccggctgaccaacaag
gccaaacacgtgctgcgcctgcgcgaaaagggccagcgcgtgtccatcatctccgagggc
gaattcctgcagatggtcggcggtttcgggctgaccgcctag
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