Arthrobacter sp. PAMC 25486: ART_1460
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Entry
ART_1460 CDS
T03487
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
arm
Arthrobacter sp. PAMC 25486
Pathway
arm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ART_1460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arm03021
]
ART_1460
03019 Messenger RNA biogenesis [BR:
arm03019
]
ART_1460
Transcription machinery [BR:
arm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ART_1460
Messenger RNA biogenesis [BR:
arm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ART_1460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AIY01059
LinkDB
All DBs
Position
complement(1503436..1505670)
Genome browser
AA seq
744 aa
AA seq
DB search
MTETITSAAAPKSAGLAGLKLAQLQVLAGQLGITGGSRMRKGDLVDAISAHQRGSSVADR
PARSAAKTEEAAPAAAKAPAAKATAAKATAAKGAAATKVAEPAAKTTEAAVAAEPKAAAE
RPTRGRTRRAASSDGIITTGAPAVSEEAAAQAPAAAPETAAVEPSEGASGENDGDNRRQP
RTRNRRAQGGGRTQSADADETTEAPAAVVGESASGHEPAGSTDAASSEAGNGEHGEGSDR
NNRNQRNNRNQRNNNDRSANDRSSQGNHSGSTAGNNSNNNSSSTDDEDGSRNNRNRRNRR
DRNSNDSNDRNDRSGNTSNNNRNDRNDRNDRFRDRNERRRGRNAGPDFDDTELTEDDVLL
PVAGILDILENYAFVRTSGYLPGANDVYVSLQQVKKFNLRKGDAVVGAIRAPREGEDRSN
AQSARQKFNALVRVTSVNGKTPEELKDRVEFSKLVPLYPSERLRLETDPKKVGPRVIDLV
APIGKGQRGLIVSPPKAGKTLILQSIANAITINNPEVHLMMVLVDERPEEVTDMQRTVKG
EVIASTFDRPADDHTQVAELSIERAKRLVEMGMDVVVLLDSMTRLGRAYNNSAPSSGRIL
SGGVDSAALYPPKRFFGAARNIENGGSLTILATALVETGSKADEVIFEEFKGTGNMELRL
SRQLADKRIFPAVDVNGSGTRREENLLSPEEVKIMWRLRRVLSGLEMQQSLELLTSKIRE
TQSNVEFLMQIQKTTLGSKAEQDK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccataacttctgccgctgctcccaagtctgcaggtctggccggattgaaa
ttggctcaactgcaggtacttgcaggccagttgggcatcaccggcggctccaggatgcgc
aagggcgatcttgttgacgccatctcggcacaccagcgcggatcctctgtagccgaccgc
ccggcacgctcggctgcaaagaccgaggaagctgccccggcagccgccaaggcccccgct
gccaaggcaacggccgccaaggcaactgccgccaagggcgccgccgccacgaaggtcgcc
gagcctgccgccaaaaccactgaggcagctgtcgccgcagagccgaaggcagcagcagag
cggcccacccgaggccgcacccgccgtgccgccagcagtgatggcatcatcaccaccggc
gcccccgccgtcagtgaggaagccgccgcacaggcgccggcagccgctccggagacggcc
gccgtcgaaccgtcagaaggtgccagcggcgagaacgacggcgacaaccgccgccagccc
cgcacccgcaaccgccgtgcacaaggtggcggacggacgcagtcggccgacgccgacgaa
accaccgaggcgcccgccgctgttgtcggcgaatccgcaagcggccatgagcctgccggc
tcaaccgatgcagcctcctccgaggccggtaacggtgagcacggcgaaggctccgatcgc
aacaaccggaaccagcgcaacaaccgcaaccagcgcaacaacaatgaccggtccgccaac
gaccgcagcagccagggcaaccactcgggcagcaccgccggcaacaactcgaacaacaac
tcgagcagcaccgacgacgaagacggctcccggaacaaccgcaaccgccgcaaccgccgc
gaccggaattccaacgattccaacgatcgcaatgaccgcagcggcaacaccagcaacaac
aaccgcaacgatcgcaacgatcgaaacgaccgtttccgtgaccgcaatgaacgccgccgc
ggccgcaacgccggtcccgacttcgatgacaccgagctgacagaggacgatgtcctgctg
cccgtggccggcatcctggacatcctggagaactacgccttcgtgcgcacctccggctac
ctgcccggtgccaacgatgtttacgtatccctgcagcaggtcaagaagttcaacctgcgc
aagggcgacgccgtcgtcggcgccatccgcgccccgcgtgaaggcgaagaccgcagcaac
gcccagagcgcccgccagaagttcaacgcactggtgcgcgtcaccagtgtcaacggcaag
actcctgaagagctcaaggaccgtgttgagttctccaagctggttccgctgtacccctcc
gagcgcctgcgcctggaaaccgaccccaagaaggttgggccccgtgtcatcgacctcgtg
gcacccatcggcaagggtcagcgcggcttgatcgtgtccccgccgaaggctggcaagacg
ctgatcctgcagtcgatcgccaacgccatcaccatcaacaaccctgaggtccacctcatg
atggtccttgttgatgaacgccctgaagaagtcaccgacatgcagcgcaccgtcaagggt
gaggtcattgcctcaaccttcgaccgccccgccgatgaccacacgcaggttgccgagctc
tccatcgagcgcgccaagcgccttgtggaaatgggcatggacgttgttgtgctgcttgac
tccatgacccgtttgggccgtgcctacaacaactccgcaccgtcttccggacgcatcctc
tccggtggtgtggactccgcagccctgtacccgcccaagcgattcttcggtgcagcccgc
aacattgaaaacggcggctcactgaccattctggccacggcactggtggaaaccggttcc
aaggctgacgaggtcatcttcgaagagttcaagggcaccggcaacatggaactgcgcctc
tcacgccagctggctgacaagcgcatcttccccgccgtcgacgtcaacggctccggcaca
cgccgcgaagaaaacctgctttcccccgaggaagtcaagatcatgtggcgcctgcgccgc
gtgctctccggcctggaaatgcagcagtcgcttgaactgctcacctccaagatccgtgaa
acgcagtccaacgttgagttcctcatgcagatccagaagacaaccctgggttccaaggcc
gaacaagacaagtag
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