Arthrobacter sp. YN: CGK93_03050
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Entry
CGK93_03050 CDS
T05171
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
arn
Arthrobacter sp. YN
Pathway
arn00020
Citrate cycle (TCA cycle)
arn00190
Oxidative phosphorylation
arn00650
Butanoate metabolism
arn00720
Other carbon fixation pathways
arn01100
Metabolic pathways
arn01110
Biosynthesis of secondary metabolites
arn01120
Microbial metabolism in diverse environments
arn01200
Carbon metabolism
Module
arn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
arn_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
arn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CGK93_03050
00650 Butanoate metabolism
CGK93_03050
09102 Energy metabolism
00190 Oxidative phosphorylation
CGK93_03050
00720 Other carbon fixation pathways
CGK93_03050
Enzymes [BR:
arn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CGK93_03050
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
FAD_binding_3
DAO
HI0933_like
Pyr_redox_2
GIDA
Motif
Other DBs
NCBI-ProteinID:
ASN18794
LinkDB
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Position
complement(638076..639824)
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AA seq
582 aa
AA seq
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MNLNTNPERLLSTSVLVIGTGGAGLRASIELAQRGVQVLAVGKRRKHDAHTSLAAGGINA
ALGTMDPQDSWQQHAADTLRESYFLADPSIVETVARNAARGIEDLEQWGMPFAREEDGRI
SQRFFGAHKYRRTAYAGDYTGLEIQRTLMRRAAELNVPIIDTVYITRLLVADGTVFGAYG
FDVVDGTPVQIHADAVILAAGGHTRIWRHTSSRRDENTGDSFRLAALAGARIRDAELVQF
HPSGLLEPDDAAGTLVSEAARGEGGILTNALGERFMERYDPERMELSTRDRVALAAFTEV
AEGRGTQKGGVYLDVSHLPRETIMEKLPRVYRTLIDLQMLDITTTKIEIAPTAHYSMGGV
WVAPEDHGTGVNGLYAIGEASSGLHGANRLGGNSLIELLVYGRITGEHVADYVHSRTHLV
RDPAAVGIARGEMQSLLSERGTESARRLQRELRNLMTEHAGVVRTEQGLEQGLEKLTALE
ERAQLVTAHPDIAGFDDLAHAYDLLGSLLAARATLECALERRETRGAHNRADFPMADPSL
QGNFVWSTDEGVRFESLPPAPESFRALAEATADDSVAGKLVE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcaacaccaatccagaacgactcctgtccacttcggtgctggtgatcggcacc
ggcggcgccggcttgcgcgcctcgattgagctcgcccagcggggcgtgcaggtgcttgcg
gtgggaaagcgtcgcaagcacgacgcccacacgagccttgccgccggtggcatcaacgct
gctttgggcacgatggacccgcaggacagctggcagcagcacgccgccgacaccttgcgg
gagtcctacttcctggccgacccgtccatcgtcgagaccgtggcccgcaacgctgcccgc
ggcatcgaggaccttgaacagtggggtatgccctttgcccgcgaggaagatggacgaatc
tcccagcgcttcttcggcgcgcacaagtatcgccgcacggcctacgccggggactacacc
gggttggagatccagcgcacgctgatgcgccgggcggcagagttgaacgtgcccatcatc
gacaccgtctacatcacccggttgctcgtcgccgacggcaccgtctttggagcctatgga
ttcgacgttgtggacggcacccccgtgcagatccacgccgatgccgtcatccttgccgca
ggcggacatacccgcatctggcggcatacctcttcccgtcgcgatgaaaacaccggggac
tccttccggctggccgccctggccggagcccggatccgcgacgccgagctggttcagttc
cacccgtcagggctgttggagcccgacgacgccgccggcaccttggtctcggaggcagcg
cgaggcgaaggaggcattctcaccaacgccctcggtgagcgcttcatggaacgctacgac
cctgagcgcatggaactttccacccgggaccgggttgcgctggccgccttcaccgaagtc
gccgaaggtcgcggtacccagaagggcggcgtctacctggacgtgtcccacctgccacgg
gaaaccatcatggaaaagctgcctcgggtctaccgcaccctgatcgacctgcagatgctg
gacatcaccaccaccaaaatcgagattgcgcccaccgcccactactcgatgggtggggtc
tgggttgcgcccgaggaccacggaacgggagtcaacggcctctacgcaatcggcgaggca
tcgtccgggctgcacggcgccaaccgtctcggcggcaattcactgattgagctgctcgtt
tacggacgtataaccggcgagcatgtggccgactacgtccattcgcgtacccatctggtc
cgggatcccgccgctgtaggaatagcccgcggggaaatgcagtcactgctcagtgaacgc
ggaacagaatccgcacggcggctgcagcgtgaactacgcaacctcatgaccgaacacgcc
ggggtggtccgcactgaacagggactggaacaaggactcgagaagctgacggccttggag
gagcgcgcccagctggtcaccgcccacccggacatcgccgggttcgatgatctggcccac
gcctacgaccttctcggctccctgctggcagcacgggccaccctcgagtgcgcccttgaa
cgccgcgaaacccgcggcgcccacaaccgtgctgacttcccaatggcagatccctcactc
caggggaactttgtctggtcaacagatgagggcgtcagattcgaaagtctgcctccggct
ccggagtccttccgagcccttgccgaggccaccgcggacgattccgtcgccgggaagctc
gtcgagtaa
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