Arthrobacter sp. YN: CGK93_08095
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Entry
CGK93_08095 CDS
T05171
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
arn
Arthrobacter sp. YN
Pathway
arn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGK93_08095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arn03019
]
CGK93_08095
03016 Transfer RNA biogenesis [BR:
arn03016
]
CGK93_08095
Enzymes [BR:
arn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CGK93_08095
Messenger RNA biogenesis [BR:
arn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CGK93_08095
Transfer RNA biogenesis [BR:
arn03016
]
Prokaryotic type
tRNA degradation factors
CGK93_08095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_PNO1_2nd
KH_2
PCB_OB
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ASN19653
LinkDB
All DBs
Position
1795637..1797889
Genome browser
AA seq
750 aa
AA seq
DB search
MEGPEIQFSEAIIDNGRFGKRVIRFETGRLAKQAAGASMVYIDEDTALLSATTAGKQPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFVKGLRNEVQ
IVVTVLAINPDELYDVVAINASSMSTQLSGLPFSGPIGGVRVALIADEQGSQWVAFPKHS
QLENAVFNMVVAGRITGDDVAIMMVEAEATDNSWNLIKEQGATAPTEEVVSEGLEAAKPF
IKALCEAQADLAARAAKPTVEFPVFLDYQDDVYAAVEAAAADKLAAVFQIADKQDRDTAS
DELKDEVLGALAGNFEGREKELSAAFRSVTKQVVRQRILKDQIRIDGRGLTDIRQLTAEV
EVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPVTRKRYMHNYNFPPYSTGETG
RVGSPKRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTLSML
NAGVPLKAAVAGIAMGLVSDQVDGQTRYAALTDILGAEDAFGDMDFKVAGTSEFVTAIQL
DTKLDGIPASVLAAALKQAREARLHILEVINAAIDTPDELSEFAPRVIAVKIPVDKIGEV
IGPKGKMINQIQEDTGADISIEDDGTVYIGATNGPSADAARSAINAIANPQVPEIGERYL
GTVVKTTTFGAFVSLTPGKDGLLHISELRKLANGKRVDNVDDVVSVGQKVQVEITKIDDR
GKLSLSPVVAEEDGAVAEDAPAEAAEESAE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatccagttctccgaagccattatcgacaacggtcgtttcggcaag
cgcgtcattcgcttcgaaaccggccgcctcgccaagcaggcagccggcgcttcgatggtc
tacatcgacgaagacaccgcattgctttccgcaaccaccgcaggcaagcagccgcgcgaa
ggtttcgacttcttcccgctgacggttgacgttgaagagcgcatgtacgctgccggccgt
atcccgggctcgttcttccgccgcgaaggccgcccgtccaccgaagccatcctggcttgc
cgcctcatggaccgtcccctgcgccccgcgttcgtcaagggcctgcgcaacgaggtccag
atcgtcgtcaccgtcctggcgatcaaccccgatgagctctacgacgtcgtcgccatcaac
gcgtcctcgatgtccacgcagctttccggcctccccttctccggcccgatcggtggcgtc
cgcgtcgccctcatcgccgacgaacagggttcgcagtgggttgctttccccaagcactcc
cagcttgagaacgccgtcttcaacatggttgtggccggccgcatcacgggtgacgacgtc
gccatcatgatggttgaagccgaagccacggacaactcctggaacctcatcaaggaacag
ggcgccacggctcccaccgaagaggttgtctccgagggcctcgaggctgcaaagccgttc
atcaaggcactgtgtgaagcacaggcggacctggctgcacgcgctgccaagcccaccgtc
gagttccccgttttcctggactaccaggacgatgtttacgccgctgttgaagccgctgct
gccgacaaactggctgctgtcttccagatcgctgacaagcaggaccgcgacaccgcctct
gacgagctcaaggacgaagtcctgggcgcgcttgccggtaacttcgaaggccgcgagaag
gaactctccgcagctttccgctcggtcaccaagcaggttgtgcgccagcgcatcctcaag
gaccagatccgcatcgacggccgtggcctaacggacatccgccagctcaccgccgaggta
gaggttcttccccgcgtccacggttcggccatcttcgagcgcggcgagacccagatcatg
ggtgtcaccacgctgaacatgctcaagatggagcagcagatcgactcgttgtcgccggta
acgcgcaagcgctacatgcacaactacaacttcccgccgtactccaccggtgagaccggc
cgcgtcggttcgccgaagcgccgcgaaatcggccacggtgcacttgcagagcgcgccctg
gttccggttctgccgacgcgtgaagagttcccgtacgccatccgccaggtgtccgaggcc
ctcagctccaacggctcgacgtccatgggctcggtctgtgcttcgaccctttccatgctc
aacgccggtgtgccgttgaaggcagcagttgccggtatcgccatgggcctggtttccgac
caggttgacggccagacccgctacgcagcgctgaccgacatcctcggcgccgaagacgct
ttcggcgacatggacttcaaggttgccggtacgtccgagttcgtcacggccatccagctg
gacaccaagctcgacggcatccccgcttcggtgctggcagcagcactgaagcaggcccgc
gaagcccgcctccacatcctcgaggtcatcaacgcagcgatcgacaccccggatgagctc
tccgagttcgctccgcgcgtcatcgccgtcaagatccccgtggacaagatcggcgaggtc
attggccccaagggcaagatgatcaaccagatccaggaagacacgggcgcggacatctcc
atcgaagatgacggcacggtctacatcggcgctaccaacggtccgtctgccgatgcagca
cgttccgccatcaacgccatcgccaacccgcaggtcccggaaatcggtgagcgctacctg
ggtacggtcgtcaagaccaccaccttcggcgccttcgtctccttgaccccgggcaaggac
ggcctgctgcacatctccgagctccgcaagctggccaacggcaagcgggtggacaacgtt
gatgacgtagtctccgtgggccagaaggtccaggtcgagatcaccaagatcgatgaccgc
ggcaagctttccctctccccggttgttgccgaggaagacggcgcagttgccgaggacgct
ccggctgaggccgctgaagagtccgcagagtag
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