Arthrobacter sp. YN: CGK93_08885
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Entry
CGK93_08885 CDS
T05171
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
arn
Arthrobacter sp. YN
Pathway
arn03030
DNA replication
arn03430
Mismatch repair
arn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGK93_08885
03430 Mismatch repair
CGK93_08885
03440 Homologous recombination
CGK93_08885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
arn03032
]
CGK93_08885
03400 DNA repair and recombination proteins [BR:
arn03400
]
CGK93_08885
Enzymes [BR:
arn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGK93_08885
DNA replication proteins [BR:
arn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGK93_08885
DNA repair and recombination proteins [BR:
arn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGK93_08885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASN22425
UniProt:
A0A221NSD4
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All DBs
Position
1967726..1971283
Genome browser
AA seq
1185 aa
AA seq
DB search
MTSSNDSFVHLHTHTEYSMLDGAARLGELFDETERLGMPALATTDHGYLFGAFDFWRKAT
DKGIKPIIGVEAYVTPGTARGDKERVRWGDESQRKDDVSGGGSYTHMTLLSYNNVGMRNL
FRASSIASLDSVFGKWPRLDRELLNTYSEGLIATTGCPSGEVQTKLRLGLYREAVEAAAE
FRDIFGAENYFCELMDHGLDIERRVTGDLLRLAKELNLPLVATNDLHYTHEHDAKAHEAL
LAIQSGSTLLEPTYDNGGSRFAFSGSGYYLKSPQEMRELFRDHPEACDNTLLIAERCEVS
FNTGANYMPRFPCPPGEDETSWLVKEVDTGLKYRYPHGIPDKVRKQADYELGVITSMGFP
GYFLVVADFINWAKNNGIRVGPGRGSGAGSMVAYAMRITDLDPLQHGLIFERFLNPDRVS
MPDFDVDFDDRRRSEVIDYVTKKYGDERVAMIVTYGTIKTKQALKDSSRVLGYPFSMGET
LTKALPPAVMAKDIPLADIQNPESKRYSEAGDFRQLIATDPEAAKVFETALGIEGLKRQW
GVHAAGVIMSSDPIIDVIPIMRRFQDGQVITQFDYPTSEGLGLIKMDFLGLRNLTIISDA
LENIKMNRGVDLDLENLELDDAASYELLARGDTLGVFQLDGGPMRSLLKLMKPDNFEDIS
AVLALYRPGPMGANAHTDYALRKNGIQEVIPIHPELEEPLKEILGGTFGLIVYQEQVMAV
AQKLAGYSLGQADILRRAMGKKKKSELDKQFAGFSQGMQDNGYSMAAVKTLWDILLPFSD
YAFNKAHSAAYGVISYWTAYLKAHYAPEYMAALLTSVGDDKDKSAIYLNECRRMGITVLP
PDVNESSLNFTPVGTDIRFGMGAIRNVGVNVVDAMVSTRATEGNYTSFKDFLLKVPAVVC
NKRTIESLIKAGAFDSLGHHRRALAMIHEEAIDSVITLKRNEAIGQFDLFAGFEDQEPEA
SLTTEIPDLPEWEKKDKLSFERDMLGLYVSDHPLQGLEGVLSQHAEQSITSIIGEDGPHD
GAIVTIAGMITSLSRRIAKASGNAYARAEIEDLGASMEVMFFGQVYGPIASVLAEDLIVV
VKGRLQRRDDGAVTLNCMELSVPDLSESVNGPVVITIPTFKATEAVVTDLRDVLRTHRGN
SEVRLKLMGDTKVEVMGLPVHMRVNPSPSLFGDLKVLLGPACLDN
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccagcaatgattcgttcgtccacctgcacacccataccgagtactccatgctg
gatggagcggcccgcctgggtgagttgttcgatgaaaccgaacgtctcgggatgcccgcc
ctggccaccactgaccacggctacctcttcggtgcgttcgacttttggcgcaaggccacg
gacaagggcatcaagcccatcattggcgtcgaagcctacgtcacacccggcaccgccagg
ggtgataaggaacgcgtgcgctggggcgacgaaagccagcgcaaggatgacgtttccggt
ggtggctcctacacccacatgacgctcttgagctacaacaatgtgggtatgaggaacctg
ttccgggcctcctccattgcttccctcgactccgtttttggtaagtggcccaggctggac
cgggaactgctcaacacttactccgaaggcctgatcgccaccacagggtgcccatccggc
gaggtccagaccaagctgcggctcggcctttaccgcgaggctgtggaggccgcagcggag
ttccgcgacatcttcggggcggagaactacttctgcgagttgatggaccacggcctggac
attgaacgtcgtgttaccggtgacctcctgcgcctggccaaggaactcaaccttccgctg
gtggccaccaacgacctccactacacgcacgagcacgatgccaaagcccacgaagcgctg
ttggcaatccagtccggttccacgctgctggaaccgacgtatgacaacggcggctcccgc
ttcgctttctcgggcagcggctactacctgaagtctccgcaggaaatgcgggaactgttc
cgcgaccaccctgaggcgtgcgacaacacgctcctcatcgccgagcgctgcgaagtttcg
ttcaacacgggcgccaactacatgccgcgtttcccttgcccgcccggggaagacgagacc
tcctggctggtcaaggaagtagacaccggcctcaaataccgttacccccacggcattccg
gacaaggtccgcaagcaagcagactacgagctcggcgtcattacgtccatgggcttcccg
ggctacttcctggtggttgccgacttcattaactgggccaagaacaacgggatccgggtg
ggtcctggccgtggttccggtgcaggctccatggtggcttatgccatgcgcatcaccgac
ctcgaccccctgcagcacggcctgatctttgaacgcttcctgaacccggaccgcgtttcc
atgcccgacttcgacgtcgacttcgatgatcggcgccgctccgaagtgattgactacgtc
accaagaaatacggcgacgaacgcgtggcgatgatcgtcacctacggaaccatcaagacc
aagcaggcgctgaaggactcctcccgcgtgctgggctacccgttcagtatgggtgagacc
ctgaccaaggcgcttccgcctgccgtcatggccaaggacattccgctggcggacatccag
aacccggagtccaagcgctacagcgaagcaggcgatttccgccagctcatcgctaccgat
cccgaggccgccaaggtcttcgagacggccttgggaatcgaaggcctgaagcgccagtgg
ggtgtccacgccgccggtgtcatcatgtcctcggaccccatcatcgatgtcattcccatc
atgcgccgtttccaggacggccaggtcatcacccagttcgattacccgacgtccgaaggc
ctcggcctgatcaagatggactttttgggcctgagaaacctgacgatcatttcggatgcc
ttggaaaacatcaagatgaaccgtggcgtcgacctggacctggagaacctggaactcgac
gacgccgcttcctatgagctccttgcccgcggtgacaccctgggcgtgttccagcttgac
ggcggacccatgcgatccttgctcaagctgatgaagcctgacaactttgaagacatctcc
gctgtcctggcgttgtaccgccctggtcccatgggcgccaacgcccacactgactacgcg
ctgcgcaagaacgggatccaagaggtcattcccatccacccggagctggaagaacccctc
aaggaaatcctcggcggcaccttcggcctgatcgtatatcaggagcaggttatggccgtg
gcacagaagctggccggatactcactgggccaggctgacattcttcgccgtgccatgggt
aagaaaaagaaatccgaactggacaagcagtttgccggcttctcccaaggcatgcaggac
aacggttactccatggctgccgtgaagaccttgtgggacattctgcttccgttctccgat
tacgcgttcaacaaagcccactcggctgcgtacggcgtgatctcttactggacggcctac
ttgaaggcgcactacgcgccggaatacatggctgcactgctgacctcggtgggcgatgac
aaggacaaatcggccatctacctcaatgagtgccggcgcatgggcatcacggtcctgccg
cctgatgtcaacgaatcctcgctgaacttcacgcctgtgggaacggacatccgtttcggc
atgggtgccatccgtaacgtcggtgtcaacgtggtggacgccatggtctcaacgcgcgcc
accgagggcaactacacctcgttcaaggattttctcttgaaggttccggccgtggtgtgc
aacaagcgcaccatcgaatcgctgatcaaggccggcgctttcgattcgctggggcaccac
cgccgggctttggccatgatccacgaagaagccatcgattccgtgatcaccctcaaacgc
aacgaggcaattggccagttcgacctcttcgccggtttcgaggaccaagagcccgaagcg
tcgctcaccacggaaatcccggaccttcccgagtgggagaagaaggacaagctgtccttc
gaacgggacatgctgggactctacgtttcagatcatcccctgcagggactggaaggcgtt
ctcagccagcacgccgaacagtccattacctcgatcatcggtgaggacggaccgcacgac
ggcgcgattgtcaccatcgcgggcatgatcacctcgttgagccgcaggatcgccaaggcc
agcggcaacgcctacgcacgggcagaaattgaagacctcggcgcatccatggaagtcatg
ttcttcgggcaggtctacggtcctatcgcctccgtcctggcggaggacctcattgtggtg
gtcaagggcaggctccagcgtcgggacgacggcgcagtgacgttgaactgcatggagctt
tcggtgccggacctcagcgaaagcgtcaatggtcccgtggtgatcaccattcccacgttc
aaggccaccgaagctgtagtaacggacctgcgtgatgtgctgcgcacccaccgcgggaac
tccgaagtccggctcaagctgatgggtgataccaaagtggaggtcatggggctgcccgtg
catatgcgggtcaatcccagcccgtccctttttggtgacttgaaggtcctgctgggcccg
gcctgcctggacaactag
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