Arthrobacter sp. YN: CGK93_12645
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Entry
CGK93_12645 CDS
T05171
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
arn
Arthrobacter sp. YN
Brite
KEGG Orthology (KO) [BR:
arn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
arn03051
]
CGK93_12645 (pafA)
Enzymes [BR:
arn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CGK93_12645 (pafA)
Proteasome [BR:
arn03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CGK93_12645 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
ASN20423
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Position
2801879..2803243
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AA seq
454 aa
AA seq
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MDKRIFGIETEFGISYSSPDSRPLAPEEVARYLFRKVVSWGRSSNVFLTNGSRLYLDVGS
HPEYATAECDDLAQLIAHDRAGELILDDLVDEAQARLAAEGFNGTVYLFKNNTDSAGNSY
GSHENYLIPRRGEFSRLAEILIPFLVTRQLIAGAGKVLKTPHGATFAFSQRADHIWEGVS
SATTRSRPIINTRDEPHADAEFYRRLHVIVGDSNMSETTALLKVGTVDLILRMIESGVIM
RDMRMENPIRSIREISHDLTGRALVRLANGRQLTALDIQREYLTKVTEFVATNGAHNPHV
PLILDLWKRTLDAIESGDTSTIDTEVDWAIKKKLMDGYMRRHDLSLDSPRIAQLDLTYHD
ISRQRGIFFLLQARGAARRLVTETEVKDAVDAPPQTTRAKLRGDFVRRAQELGRDYTVDW
VHLKLNDRAHQTILCKDPFRSVDERVDALLDSMS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagaatatttggcatcgaaacggaattcgggatctcatattccagcccggat
tcacggccactggctcccgaggaagtagcccgctacctcttccgcaaggtggtcagttgg
ggccgttcgtccaatgtgttcctgaccaacggctcgcggctgtacctggatgtgggttcg
catccggagtatgccacggccgagtgcgacgacctcgcacagttgatcgcccatgacagg
gcgggtgagcttatcctggacgacctcgtggatgaggcccaggcaaggctggcggcagag
ggcttcaacggcactgtttacctgttcaagaacaacaccgactccgcgggaaactcctac
ggcagccacgagaactacctgatcccgcgccgcggcgaattttcccgcctggctgagatc
ctcatccccttcctggtgacgcgccagctgatcgccggtgcaggcaaggtcctcaagaca
ccgcatggggccaccttcgcgttctcccagcgggcggaccacatctgggagggcgtgtcc
tcagccaccaccaggtcccgccccatcatcaatacccgcgatgagccccacgcggatgca
gaattttaccgccgcctccatgtgatcgtcggggacagcaatatgtcagaaaccacggcc
ctgctcaaagtgggaacagtggacctgatcctccgcatgatcgagtcgggcgtcatcatg
cgcgacatgcggatggagaaccccatccgcagcatccgcgaaatctcacatgacctcacg
ggccgcgccctggtcaggcttgccaacggccggcagctcaccgccctcgatatccagcgc
gaatacctcaccaaggtcactgaatttgtcgccaccaacggggcacacaacccccacgta
ccgctcatcctggacctgtggaagcgcacgctggacgccatcgaaagcggcgatacgtct
accattgataccgaggtggactgggccatcaagaagaagttgatggacgggtatatgcgc
cggcacgacctcagcctggactctccacgaatcgcccaacttgacctcacctatcacgat
atctcgcggcaacgcggcatcttcttcctattgcaggcacggggggcagcacgtcggctg
gtcacggaaacagaggtcaaggacgccgtggacgcaccgccgcaaacaacgcgggcgaaa
ctgcgcggagactttgtccgccgggcccaggaacttggccgtgactacaccgtggattgg
gtccacctgaagctgaacgaccgcgcccaccagacaattctgtgcaaggacccgttccgg
agcgtcgacgagcgggtggatgcgctcctggactctatgagctga
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