Arthrobacter sp. YN: CGK93_14490
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Entry
CGK93_14490 CDS
T05171
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
arn
Arthrobacter sp. YN
Pathway
arn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGK93_14490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arn03400
]
CGK93_14490
Enzymes [BR:
arn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CGK93_14490
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CGK93_14490
DNA repair and recombination proteins [BR:
arn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGK93_14490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
HpcH_HpaI
NFACT_N
PSMbeta
Motif
Other DBs
NCBI-ProteinID:
ASN20754
UniProt:
A0A221NLD9
LinkDB
All DBs
Position
complement(3163611..3164579)
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AA seq
322 aa
AA seq
DB search
MPELPEVEVVRRGLARWVRGRSVTGVDVLDPRSIRRHALGTEDFIGNLEHATVLDVVRRG
KFLWMPLAMPGLPDTESGPAEDLPAVALMAHLGMSGQLLMQDPDVPDEKHLKVRIKLSPV
DGMPEQLRFVDQRIFGGLFVTSLVPTPDGGPGGLGETPLPEIAEEAAHIARDPLDPHFSF
DAFYRRIKNRKTGIKRALLDQSVISGIGNIYADEALWRARLHYARATDTMRRADAEKLVE
AVKDVMNAALAAGGTSFDSLYVNVNGDSGYFARSLNAYGRAGELCGRCEAIGLHSVMKRE
QFMNRSSYTCPVCQPRPRNGRW
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaagtagaggtggtacgccgcggccttgcgcgttgggtccgcggc
cgttccgtgaccggcgtcgatgtccttgatccgcggtccatccgacggcatgccctcgga
acggaagacttcatcgggaacctggaacacgccacggtgctggatgtggtgcggagaggc
aaattcctctggatgccccttgccatgccgggtttgcctgacaccgaatcaggccccgct
gaagacctccccgcggtggctctcatggcccatctgggaatgagcggccagctgctgatg
caggacccggatgttccggatgaaaaacacctcaaagtcaggatcaagctcagcccggtg
gacggtatgccggaacagttgcggttcgtggaccagagaattttcggcggcctgttcgtg
acatccttggtaccgacgcccgacggcggccctggcggcttgggcgaaacaccccttccg
gagatcgcggaggaagctgcccacattgcccgggatccattggatccccatttttccttc
gacgcgttctaccgaaggatcaagaaccgtaagacgggcatcaagagggcgctgctggat
cagtcagtcatctccggcatcggcaatatctacgcggacgaagctttatggcgtgcccgt
ctccattacgccagggctacggacaccatgcgtcgtgcggatgccgagaaactggttgaa
gcggtcaaggacgtcatgaacgccgcattggccgctggcggaacaagcttcgactccctc
tacgtgaatgtcaacggagactccgggtattttgcacggtcgctcaacgcgtacgggcgt
gccggagaactgtgcggccgttgcgaggcaatcggccttcacagcgtcatgaaaagggaa
cagttcatgaaccgttcctcctatacgtgtcccgtgtgccaaccccggccacggaacgga
cgatggtag
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