Arthrobacter sp. YN: CGK93_15815
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Entry
CGK93_15815 CDS
T05171
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
arn
Arthrobacter sp. YN
Pathway
arn03420
Nucleotide excision repair
arn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
arn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGK93_15815
03430 Mismatch repair
CGK93_15815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arn03400
]
CGK93_15815
Enzymes [BR:
arn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGK93_15815
DNA repair and recombination proteins [BR:
arn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGK93_15815
MMR (mismatch excision repair)
Other MMR factors
CGK93_15815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ASN20978
UniProt:
A0A221NME5
LinkDB
All DBs
Position
complement(3457391..3460924)
Genome browser
AA seq
1177 aa
AA seq
DB search
MTTELLDGFAAALPGTRGGTHVPEPRFSPSELAGILGEKNRPTAEQSDIIASSLSPRLVI
AGAGSGKTATMADRVVWLVANGWVRPEEVLGVTFTRKAAGELASRIRSKLATLQRIAAED
DGSIGFPEGLLGADDLEPKVSTYHSYASGIVTDYGLRLGIERDVVLLGGAQSWQLASEVV
EAYDGDYEHFTAAKSTLVNAVIQLAGECAEHLQDPGSVRNWVLERVETFEQLPYIAGASK
NPTQAAASLAAMLRTRASVADMVVRYQEAKRQRGVLDFGDLVALAARIASDIPLAASTER
ARYKVVLLDEFQDTSHAQLVLFSRLFGQGHAVTAVGDPNQSIYGFRGASAGQLFHFVQEF
PVLHTDTTGGAETYSVAPTSYLTTAWRNGRNILEAANTIAAPLNNAAATDGPAGDRDTAG
NVSVPALAPSPAAVDGSVVIGRFSTDEDEAAVIARDVRRYKRTVFEEEKDGTPVKPTVAV
LCRRRAQMECLRREFELQGIAYEIVGLGGLLDTPEIVDLVATLRVLADPGRSDALMRLLA
GARWRIGPADLMAFNDWSRFLARRRSNPGTAFEPMDANEEPAAVVVESDITDASSLVEAL
DFLPKPGWTSGHGRTLSPAALERLTRLASELRSLRSYIGDDLTTLLGEVERAMLLDIEVA
AKPGISIHQARRNLDAFQDAAAGFLQTSQRIDLLAFLSWLEAAASEEGGLDLAPVETNRE
AVQLLTVHASKGLEWDVVFVPGLNAGSFPSTRDSRWSSGAAALPWPLRGDRADLPQWDLD
QPDQKGWLDAEKDFKAEVQHHGEAEERRLAYVAYTRAKFVLWASSAAWNGSRSGMAGMSA
FLSDLAPLAGVAGVAAGEGTGSPAGRTGSAVVHPESVAEEALPEESPLTTTLEVAGFPYD
PLEGPSDPRTGARLRLAPGRRLAMDQAAATVRAFIADAPYQTQASELTGPAAKWAQEADL
LLDRQQQRKTTQDVHLPSHISASLFVDLGADPAAVLSQLRRPVPREPGISARKGTAFHAW
VEEYFGTTGMLDLDEAPGSDSHIDEAYGLDEMVASFKKSEWAQRAPAFVEVPVETRIGDV
VVRGRIDAVFRDADGRWQLIDWKTGRRPAGQQLATRAVQLAVYRLAWARLQGVPLEEVSA
AFYYVADDSVVRPHDLGTADELEHIVAKALEAGGQGR
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagagctcctggacggatttgccgccgcgctgcccggcacccgtggcggcaca
catgttcccgaaccccggttttctccgtctgagctggccggcatccttggcgagaagaac
cgtcccactgccgaacagtcggacatcattgcctcttcgctgtcaccccggctggtgatc
gccggcgctggctccggtaagacagccaccatggcggacagagtggtgtggctcgttgcc
aatgggtgggtccgtccggaggaagtgcttggcgtgacgttcacgcgtaaagctgccggc
gaactggccagccggatcagaagcaaactggccaccctccagcgcatcgcggcagaggac
gatggcagcatcgggttcccggaggggctcctgggggctgacgacctcgaacccaaggtt
tccacctaccactcctatgcaagcggcatagtgaccgattatgggctgcggctgggcata
gagcgcgacgtcgtcctgctgggtggggcacagtcctggcagctggccagcgaagtagta
gaggcatacgacggcgactacgagcatttcactgcggccaagtccactttggtcaacgcc
gtcatccagctggcgggggagtgcgccgaacaccttcaggatcctggctcagtacgcaac
tgggtgttggagcgcgtggagaccttcgagcagcttccctatatagctggtgccagcaaa
aaccctacccaggcagcagcatcattggccgccatgctccggacccgcgccagcgtggca
gacatggtggtgcgctaccaggaagcaaagcggcaacgcggagtccttgattttggggac
ctcgtggcccttgctgcccggatcgccagcgacattccgctcgcagcctccacggagcgg
gcccggtacaaggtggttctcctggacgaattccaggacacctcccatgcccagctggtg
ctcttctcacgcctcttcggccaaggtcacgccgtgacagcggtaggggaccccaaccag
tcgatttatggattccggggtgcctctgccgggcagctcttccactttgtacaggagttc
ccggtcctgcacacggacaccaccggtggcgcagagacttattctgtggctccgacctca
tacctgaccaccgcctggcggaacggcaggaacatccttgaggcagccaacaccatcgcc
gcgccgctgaacaatgctgcggccacggacggcccggcaggggacagggacacagccggc
aacgtctcagtcccggcgctggccccgagtccggcggcggtggatggaagtgtggtgatc
ggtcgtttcagcacggatgaggatgaagctgccgtcattgcccgtgatgtccgtcgctac
aaacggacagtcttcgaggaagagaaggacgggacgcccgtcaagccgaccgtggctgtc
ctgtgccggaggcgggcacagatggagtgcctccgccgggaattcgagctgcagggtatc
gcctacgagatcgtcggtcttggcggcctgttggacactccggaaatcgtggacctggtg
gccaccttgcgggtgttggctgatcccgggcggtccgatgccctgatgaggctgctggcc
ggggcccgatggcgtattggcccggcagacctgatggccttcaatgactggtcgcgtttc
ctcgctcgccgccggtcaaatccgggcacggctttcgaacccatggatgccaacgaggaa
ccggccgcggtggtggttgaaagtgacatcaccgatgcctccagcctggtggaggccctt
gacttcctgcccaagcccggctggacgtccgggcatggtcgcaccctgagtcccgcagcc
ctggaacgactgacccgtcttgcctcggaacttcgttccctccggagctacatcggggat
gacctcacaacgctccttggtgaggttgaacgcgccatgctcctggatatcgaggttgcc
gccaagcctggaatcagcatccaccaggcacgccggaacctggatgcgttccaggatgcc
gcggccggattcctgcagacatcccaacggattgatctgctggccttcttgtcgtggttg
gaggcagcggcctccgaagaaggcggattggatctggcccctgtggagaccaaccgggaa
gctgtgcaattgctgacggttcacgcctcgaaggggctggagtgggacgtcgtcttcgtc
cctggcctcaatgccggatcattccccagcaccagggattcacgatggagcagtggggct
gcggcgctgccttggccgttgcggggcgaccgcgccgacctcccgcagtgggacctggac
cagccagaccaaaagggatggctggacgcggagaaggatttcaaggccgaggtccagcat
cacggtgaggccgaggagcgacggctggcttatgtggcctacacccgggcaaagttcgtc
ttatgggcgtccagtgctgcttggaacggttcgcgctccggaatggccggtatgtccgcc
ttcctctccgacttggcgcctcttgctggagttgcgggagttgccgcaggagaaggtact
gggtcgcccgcgggccggacaggttcggcggtggttcatcccgaatccgtggccgaggaa
gcactccctgaggaaagcccactgacgaccacacttgaagttgcagggttcccctacgat
ccccttgaaggcccgtccgatccccggacgggcgcccgtcttaggctggctcccggacgc
aggctggccatggaccaggccgcggccaccgtccgtgcgttcatcgccgacgcaccgtac
cagacacaggcctctgagctcacggggcctgcggcgaaatgggcccaggaagcagacctg
ctccttgaccgtcaacagcagcgcaagaccacccaggacgtccaccttccgagccacatc
tctgcctcactcttcgtggacctcggcgcggacccggctgcagtgctttcgcagctccgc
aggccggtgccaagagaacccggtatttcggcgcgtaaaggcacggccttccatgcgtgg
gttgaagagtacttcggtacaacgggcatgcttgacctcgatgaggccccgggctcggat
tcccacatcgacgaggcatacggcttggacgagatggtggcgtcgttcaaaaagtccgag
tgggcccaacgtgcgcccgccttcgtcgaggtgcctgtggagacaaggattggcgacgtc
gtagtccggggacgcatcgatgctgtgttccgcgacgcggacggccgctggcagttgatc
gactggaaaaccggccgacgacccgcaggccaacagttggcgacgcgtgccgtgcagttg
gccgtttaccggctggcctgggcccggcttcagggtgtgcccctcgaagaggtcagcgcg
gcgttctattacgtggcggatgactcagtggtccggccacacgatctgggaaccgccgac
gaactggaacacatcgttgccaaggcgttggaggccggcggtcagggacgctag
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