Rhizobium rhizogenes K599: B0909_02765
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Entry
B0909_02765 CDS
T04767
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aro
Rhizobium rhizogenes K599
Pathway
aro03420
Nucleotide excision repair
aro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B0909_02765
03430 Mismatch repair
B0909_02765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aro03400
]
B0909_02765
Enzymes [BR:
aro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0909_02765
DNA repair and recombination proteins [BR:
aro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B0909_02765
MMR (mismatch excision repair)
Other MMR factors
B0909_02765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Peptidase_M13
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AQS63131
UniProt:
A0AAN2DD32
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All DBs
Position
1:1755503..1757977
Genome browser
AA seq
824 aa
AA seq
DB search
MSNSFDDMPFFDEEPVAPRRATNNAGAESGGGLGIAARAMAARDQTRAAPDYLSGLNPEQ
RDAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERI
GVLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLKSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYTAYQNRLKTLNACDFGD
LLMHPISIFRRHTDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRAKGEPQNVCCVG
DDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKT
LFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKNHNLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTIRN
LHDYARARDIPMLAAAADIIETDELKPKARKALFDVVQDFRRWQGLLENTEHTTLAEQIL
DESGYTAMWQADKTAEAPGRLENLKELIRSMEAFESMRGFLEHVALVMDAEQNENLDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRAGLEEERRLAYVGITRAKKLCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSSYGGYGGRGGYGQSRFDKADPFANN
YSTPGWKRAQQNRSDATRDNWGTRSGHAVERIGYGESGPRTRTIDGELVAKSVADTPSKY
FVGDRVFHLKFGNGNISAIEGNKLTIDFDRAGQKRVLDGFVEKV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagttttgacgatatgccgttcttcgatgaggaacccgtggcgccgcgcagg
gcgacgaacaatgccggtgcggaaagcggcggcgggcttggcattgccgcccgcgccatg
gcggcgcgcgaccagacgcgtgccgcgcctgattatctttccggcctcaacccggaacag
cgcgatgccgttgaaacgctggacggacccgttctcgttctcgccggcgccggcaccggc
aagacccgcgttctgacgacccgcatcgcccatattctggcgaccggccgcgcctatccc
agccaaatccttgccgtgaccttcaccaacaaggccgcccgcgagatgaaggaacgtatc
ggcgttctggtcggcggcgctgtcgagggcatgccctggctcggaaccttccactccatc
ggcgtcaagctattgcgccgccatgccgaactcgtcggccttaaatcggatttcaccatt
ctcgataccgacgacgtggtgcggctgatcaagcagctcatccaggccgaaggtcttgat
gacaagcgctggccggccaaacagttcgccggcatgatagacggctggaagaacaagggc
ctgacgccgccggatattccggagggcgacagccgcgccttcgccaacggcaagggccgc
gagctttacaccgcctatcagaaccggctgaaaacgctgaacgcctgcgacttcggcgac
cttctgatgcacccgatcagcatcttccgccgccacaccgatattctgaaagagtatcac
cagaagttccgctacattctggtggacgaatatcaggacaccaacacggcgcaatatatg
tggctcaggctgctggcccagcgcgccaagggcgaaccgcagaacgtctgctgcgtcggc
gacgacgaccagtcgatctatggctggcgcggcgcggaagtggacaatatcctccgcttc
gacaaggattttccgggcgccaaggtcatcaagctcgagcgaaactaccgttccaccgaa
catattctcggcgccgccggccatctgatcgcccataatgagggacgcctcggcaaaacg
ctgtttaccgaacgcagcagccctgacgatgaaaaggtcgtggtgcatgccgcctgggat
tccgaggaggaagcccgcgcggtcggcgaggaaatcgaacagcttcagcgcaagaaccat
aatctgaacgacatggccattctcgttcgcgcctccttccagatgcgcgagttcgaagac
cgcttcgtcacgctcggcctcaattaccgcgtcattggcggcccgcgcttttatgagcgc
ctcgaaatccgcgacgccatggcctatttccgccttgtctgccagccggcagacgatctt
gccttcgagcggatcgtcaacacaccgaagcgcggccttggcgatacgacgatccgcaat
ctgcacgattacgcccgcgcccgcgatattccgatgctggccgcagccgccgacatcatc
gagaccgacgagctgaaaccgaaggcgcgcaaggcgctgttcgacgtggtgcaggatttc
cgccgctggcagggcctcctggaaaacaccgaacacaccacgcttgccgagcagattctc
gacgaaagcggctataccgccatgtggcaggccgacaagacggcagaagcgcccggacga
ctggaaaacctgaaggaactcatccgctcgatggaagccttcgagagcatgcgcggcttc
cttgagcacgtcgccctcgtcatggatgccgagcagaacgaaaatctcgatgccgtctcc
atcatgacgctgcattccgccaagggtctggaattcgacaccgtattcctgccgggctgg
gaagaaggcctgttcccgcaccagcgggcgctggatgagggcggccgcgccggtctggag
gaagagcgccgccttgcctatgtcggcatcacccgcgccaagaagctctgccatatctgg
ttcgtgtcgaaccggcgcattcacgggctgtggcaatccaccctgccctcccgtttcctt
gatgaactgccacccgcccatgtggatgtggcggcgtccgacagcagttacggcggttat
ggcggccgcggcggctacggccagtcccgattcgacaaggccgatcccttcgccaacaac
tactccactcccggctggaagcgcgcgcagcagaaccgcagcgacgccacccgcgacaat
tggggcacccgctccggccatgcggtcgaacggatcggttatggcgaaagcggcccgcgc
acccgcaccatcgacggcgagctggtggcgaaatccgtggccgacacgccatcgaaatac
tttgtcggcgaccgcgtcttccacctcaaattcggcaacggcaatatttccgccatcgag
ggcaacaagctgaccatcgacttcgatcgcgccgggcagaaacgggtgctggacggattt
gtggaaaaggtttga
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