Martinezella rhizogenes K599: B0909_03230
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Entry
B0909_03230 CDS
T04767
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aro
Martinezella rhizogenes K599
Pathway
aro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B0909_03230 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aro03021
]
B0909_03230 (rpoB)
03400 DNA repair and recombination proteins [BR:
aro03400
]
B0909_03230 (rpoB)
Enzymes [BR:
aro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B0909_03230 (rpoB)
Transcription machinery [BR:
aro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B0909_03230 (rpoB)
DNA repair and recombination proteins [BR:
aro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B0909_03230 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AQS61384
UniProt:
A0AAN2A2C9
LinkDB
All DBs
Position
1:complement(1668085..1672221)
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPKGGRPDEGLNAVFK
SVFPITDFSGASMLEFVSYEFEAPKFDVEECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQSVYMGDMPLMTNNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVYARIDRRRKLPVTSLLMALGMDGEDILSTFYTKASYER
DGDGWRIPFQPETLKNAKVVTDMIDADTGEVVVEAGKKLTPRLIRQLSEKGLKALKATDE
DLYGNYLAEDIVNYETGEIYLEAGDEIDEKTLGLILQSGFDEIPVLNIDHVNVGAYIRNT
LSADKNENRQEALFDIYRVMRPGEPPTMESAEAMFNSLFFDAERYDLSAVGRVKMNMRLD
LDAEDTVRTLRKEDILAVVKMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIVDGKVTNDVIYLSAMEEAKYYVAQANAPLNDDGSFSEEFVVSRHSGEVMLAPRDNI
NLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVAR
DSGAAIAARRGGVVDQVDATRIVIRATEDLDAGKSGVDIYRLQKFQRSNQNTCVNQRPLV
SVGDAISKGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILMSERIVSDDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYGRLIDMLRGHVSIAGPKGFKKGVELSNAVVSEYPRSQWW
MFAVEDEKAQSELEALRGQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHVDICLNPLGVPSRMNVGQILETHLA
WACAGMGKKIGEMLEEYRKTMDISELRSELTEIYASEANDEVQRFDDDSLVKLAEEAKRG
VSIATPVFDGAHEPDVAAMLKKAGLHESGQSVLYDGRTGEPFDRKVTVGYMYMIKLNHLV
DDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVA
GRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENSKIENQPEDQLPDAAE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcgtttaacggtcgcaggcgcgtacgcaagtttttcggcaaaatt
ccagaagtagcggaaatgccgaacctcatcgaggttcagaaggcttcgtatgaccagttt
ctcatggttgacgagcccaagggtggccgtcccgacgagggattgaatgccgtattcaag
tccgtattcccgatcaccgatttctcgggcgcctccatgctcgaattcgtatcctacgag
ttcgaagcgccgaagttcgacgtcgaggaatgccgtcagcgcgatctgacctatgcagcg
ccgctgaaagtgacgctgcgcctcatcgtgttcgatattgacgaggatacaggcgcgaag
tccatcaaggacatcaaggaacagtccgtctacatgggcgacatgccgctcatgaccaat
aacggcacgttcatcgtcaacggtaccgagcgcgtcatcgtttcgcagatgcaccgttcg
ccgggcgtgttcttcgaccacgacaagggcaagagccattcttccggcaagcttttgttc
gctgcccgcgtcatcccgtatcgcggttcctggctcgatatcgagttcgacgccaaggac
atcgtctatgcgcgtatcgaccgtcgccgcaagctgcccgtgacctcgctcctgatggcg
ctcggcatggatggcgaagacattctgtcgaccttctacaccaaggcttcctatgagcgc
gacggcgacggctggcgcattccgttccagcccgagacgctgaagaacgccaaggtcgtc
accgacatgatcgacgccgataccggcgaagtcgttgtcgaggccggcaagaagctgacc
ccgcgccttatccgccagctttccgaaaagggcctcaaggcgctgaaggcgaccgacgag
gacctgtacggcaactatctggccgaagacatcgtcaactacgagacgggcgaaatctat
ctcgaagccggcgacgaaatcgatgagaagacgcttggtcttatcctgcagtccggcttt
gacgagattccggttctcaacatcgaccacgtcaatgttggcgcctacatccgcaacacg
ctgtctgccgacaagaacgaaaaccgtcaggaagccctgttcgacatctaccgcgtcatg
cgtccgggtgagccgccgaccatggaatcggcggaagcgatgttcaactcgctgttcttc
gatgcagagcgttacgacctttcggccgttggccgcgtcaagatgaacatgcgtctcgac
ctcgacgcggaagacaccgtgcgcacgctgcgcaaggaagacatcctcgcggtcgtcaag
atgctggtcgaactgcgtgacggcaagggcgagatcgacgatatcgacaacctcggcaac
cgtcgtgtgcgttcggtcggcgagctgatggaaaaccagtatcgtctcggccttctgcgc
atggaacgtgcgatcaaggaacgtatgtcctcgatcgaaatcgacaccgtgatgccgcag
gacctgatcaacgcgaagccggctgctgccgccgttcgtgaattcttcggttcctcgcag
ctgtcgcagttcatggaccaggtgaacccgctttcggaaatcacccacaagcgccgtctt
tcggctcttggaccgggtggtctgacccgcgagcgcgccggcttcgaagtccgcgacgtt
cacccgacccattacggccgtatttgcccgatcgaaacgccggaaggcccgaacatcggt
cttatcaacagcctcgcgaccttcgcccgcgtcaacaagtacggcttcatcgaaagcccg
taccgcaagatcgtggacggcaaggttacgaacgacgtgatctatctctccgccatggaa
gaggccaagtattacgtcgcgcaggccaacgcgccgctcaacgacgatggttcgttctcc
gaagagttcgtcgtttcccgtcattcgggcgaagttatgctcgccccgcgtgacaacatc
aacctgatggacgtttcgccgaagcagctcgtttcggtcgcagcggctctcattccgttc
ctggaaaacgacgacgccaaccgcgctctcatgggctcgaacatgcagcgtcaggccgtt
ccgcttctgcgggcggaagcgccgttcgtcggcacgggcatggaaccggttgttgctcgc
gactccggcgctgccatcgcagctcgccgcggcggtgtagtcgaccaggtggatgcgacg
cgtatcgttatccgcgctacggaagacctcgatgccggcaagtcgggcgtcgatatttac
cgtctgcagaagttccagcgttcgaaccagaacacctgcgtcaaccagcgtccgctggtt
tccgtcggtgacgccatctccaagggtgacatcatcgcggacggtccgtcgaccgacctc
ggcgatctggcgcttggccgcaacgcgctcgtcgcgttcatgccctggaacggctacaac
tacgaagactcgatcctgatgtcggaacgtatcgtttccgacgacgtgttcacctccatt
cacatcgaagaattcgaagtgatggcgcgcgacacgaagcttggtccggaagaaatcacg
cgcgacattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggtatcgtt
tacatcggtgcggaagttcagccgggcgatatcctcgtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggtgaaaaggcttcc
gacgttcgcgacacctccatgcgcatgcctccgggcacgtttggtacggtcgtcgaagtc
cgcgtcttcaaccgtcacggtgtggagaaggacgagcgcgcgatggctatcgagcgcgaa
gagatcgaacgtctggcgaaggaccgcgacgacgaacaggcaattcttgaccgtaacgtc
tacggccgtctgatcgacatgctgcgtggccacgtttccatcgccggtccgaagggcttc
aagaagggcgtcgagctttccaacgccgtcgtctccgaatatccccgctcgcagtggtgg
atgttcgcggtcgaagacgagaaggctcagtccgaactcgaagcgcttcgcggccagtac
gacgaatccaagtcgcgccttgaacagcgcttcatggacaaggtcgaaaaggtccagcgc
ggcgatgaaatgcctccgggcgtcatgaagatggtcaaggtcttcgttgctgttaagcgc
aagatccagccgggcgacaagatggccggccgtcacggtaacaagggcgtcgtctcgcgt
atcgttccggtcgaggacatgccgttcctcgaagacggcacgcatgtcgacatctgcttg
aacccgctcggcgtgccttcgcgcatgaacgtcggccagatcctcgaaacccacctcgca
tgggcatgcgcaggcatgggcaagaagatcggcgagatgctcgaagagtatcgcaagacg
atggacatcagcgagcttcgcagcgagctgacggaaatctacgcgtctgaagccaatgac
gaggttcagcgtttcgacgacgactcgctggtgaagcttgccgaagaagccaagcgcggt
gtttccatcgcgaccccggtcttcgacggtgcgcatgagcctgacgtcgccgcgatgctg
aagaaggcaggtctgcatgaatccggtcagtccgtcctttatgacggtcgtaccggtgag
ccgttcgaccgcaaggtcaccgtcggctacatgtacatgatcaagctgaaccaccttgtc
gacgacaagatccacgctcgctcgatcggtccttactcgctcgttacccagcagccgctg
ggcggcaaggcgcagttcggcggacagcgcttcggggaaatggaagtctgggctctggaa
gcatacggcgcggcctacacgctgcaggaaatgctgaccgtcaagtcggacgacgtggcc
ggccgcaccaaggtctacgaagcgatcgtccgtggcgacgataccttcgaggccggtatt
ccggagagcttcaacgttctcgtcaaggaaatgcggtcgctcggtctttcggtcgaactg
gaaaactcgaagatcgagaaccagcccgaagaccagctgcccgacgcggcggaataa
DBGET
integrated database retrieval system
