Rhizobium rhizogenes K599: B0909_03400
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Entry
B0909_03400 CDS
T04767
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aro
Rhizobium rhizogenes K599
Pathway
aro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B0909_03400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aro03021
]
B0909_03400
03400 DNA repair and recombination proteins [BR:
aro03400
]
B0909_03400
Enzymes [BR:
aro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B0909_03400
Transcription machinery [BR:
aro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B0909_03400
DNA repair and recombination proteins [BR:
aro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B0909_03400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
HHH_XRCC3_RpoA
IDH
Motif
Other DBs
NCBI-ProteinID:
AQS61417
LinkDB
All DBs
Position
1:complement(1642110..1643120)
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AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSSRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGAVTAGDIQTVG
DIEILNPDHVICTLDDGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLIMTIETNGSVSGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaacttatcaagccgaacaaggtcgagttcacctcgtcc
agccgcaccaaggcaacgctggttgccgagccgctggagcgtggtttcggtcttaccctc
ggcaacgcgctgcgtcgcgttctgttgtcttctctgcgtggcgccgctgtaacggccgtg
cagatcgacggtgtcctgcacgaattctcctccatccccggcgttcgggaagatgtgacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggacggcgatgattccaagcgc
atggtcgtgcgcaagcagggtccgggtgccgtgaccgctggtgacatccagacggttggc
gacattgagattctgaaccccgaccacgtgatctgcacgctcgacgatggcgctgaaatc
cgcatggaattcaccgtcaacaacggcaagggttacgtaccggctgagcgcaaccgcgcg
gaagatgccccgatcggcctcattccggtggacagcctctattctccggtcaagaaagtg
tcctacaaggtggaaaacacccgtgaaggccaggttctcgactatgacaagctgatcatg
acgatcgagaccaacggttcggtttccggcgaagatgccgttgccttcgccgctcgcatt
cttcaggaccagctgggcgtcttcgtcaacttcgacgagccgcagaaggaagcagaagaa
gaatcggttaccgaactcgcgttcaacccggcgcttctcaagaaggtcgacgagctcgaa
ctgtccgttcgttcggcaaactgcctgaagaacgacaacatcgtttatatcggcgacctg
atccagaagaccgaagccgaaatgctccgcacgccgaactttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggtctgcacctcggcatggaagtgccggcatgg
ccgccagagaacatcgaagatctcgcgaagcgttacgaagaccagtactaa
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