Rhizobium rhizogenes K599: B0909_04650
Help
Entry
B0909_04650 CDS
T04767
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
aro
Rhizobium rhizogenes K599
Pathway
aro00300
Lysine biosynthesis
aro00470
D-Amino acid metabolism
aro01100
Metabolic pathways
aro01110
Biosynthesis of secondary metabolites
aro01120
Microbial metabolism in diverse environments
aro01230
Biosynthesis of amino acids
Module
aro_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B0909_04650
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B0909_04650
Enzymes [BR:
aro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B0909_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AQS63170
LinkDB
All DBs
Position
1:1396191..1397372
Genome browser
AA seq
393 aa
AA seq
DB search
MRDIVAQTGTPCFLYDASAMRRAYRSLETALSGFADIYYSVKANPLPAIIALFRQQGAGA
EIASVGEYRAAIKAGVAPENIIFAGPGKGMAELREVIEGGIGEIHIESAEEIARIEEIGK
PVKASIRINPVPDTQAGAMRMGGKATAFGFDEEELENVLPLFRDARHIDLVGVHIYGGTQ
ILDADMLVSQWRHAISLAARMAQMLGRPLETIDLGGGLGIPYFAGETPLDLATVSAAIPD
LKALVQAHPLITDAHIIVEPGRFLAGPGGLYVAEVNSVKSSRGTTFVVTDGGMHHHLAAS
GNLGQIVKRNYPIVAPAKMQADHDETATIVGPLCTPLDTLARNAALPKLKTGDLLAILQS
GAYGASASPAGFLSHAAAKEVLVEDGVFEAIGR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgatatcgtcgcccaaaccggaacgccgtgcttcctctatgatgcaagcgccatg
cgccgcgcctatcggagccttgaaacggcgctctcgggctttgccgatatctattattcg
gtgaaggccaatcccctgcccgccattatcgcgctcttccggcagcagggcgcgggtgca
gaaatcgcctccgttggcgaatatcgcgccgccatcaaggctggcgtcgcacctgagaac
atcatcttcgccggccccggcaagggcatggccgaattgcgcgaggtgatcgagggcggc
atcggcgaaatccatattgaaagcgccgaggaaatcgcccgcatcgaggagatcggcaaa
ccggtcaaagcctcgatccgcatcaaccccgtgccggatactcaagccggcgccatgcgc
atgggcggcaaggccaccgcttttggtttcgacgaggaagagctggaaaacgtcctgccg
cttttcagggacgccagacatattgatctcgtcggcgtgcacatctatggcggcacgcag
atcctcgacgccgacatgcttgtctcccaatggcgacacgccatttcccttgccgcacgc
atggcgcaaatgctgggcagaccgcttgaaaccatcgatctcggcggtggcctcggcatc
ccctatttcgccggggaaacgccgcttgatcttgcaacggtcagcgccgccattcccgat
ctcaaggcgcttgtgcaagcgcatccgctgataaccgacgcccatatcatcgtcgaaccc
ggccgcttcctcgccggccccggcggcctctatgtggcggaagtaaattcggtgaaaagc
tcacgcggcaccaccttcgtggtgacggatggcggtatgcaccaccatctggcggcctcg
ggcaatctcggccagatcgtcaagcgcaactatcccatcgtcgcgcccgccaagatgcag
gcagatcacgacgagacagcaaccatcgtcggtccgctctgcacaccgctcgacacactg
gcccgcaatgcggctctgccgaaactgaagaccggtgacttactcgccatcctgcaatcg
ggcgcctatggcgccagcgccagccctgcgggttttctcagccatgcggcagcgaaggaa
gtgctggtggaggatggtgtgtttgaggcgatcggacgctga
DBGET
integrated database retrieval system