Martinezella rhizogenes K599: B0909_06705
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Entry
B0909_06705 CDS
T04767
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aro
Martinezella rhizogenes K599
Pathway
aro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0909_06705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aro03019
]
B0909_06705
03009 Ribosome biogenesis [BR:
aro03009
]
B0909_06705
Enzymes [BR:
aro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B0909_06705
Messenger RNA biogenesis [BR:
aro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B0909_06705
Ribosome biogenesis [BR:
aro03009
]
Prokaryotic type
rRNA processing factors
B0909_06705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
zf-CCHC
Motif
Other DBs
NCBI-ProteinID:
AQS61979
UniProt:
A0AAN2A157
LinkDB
All DBs
Position
1:complement(1005867..1008782)
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AA seq
971 aa
AA seq
DB search
MADKMLIDASHEEETRVVVVRGNRIEEFDFESEHKKQIRGNIYLAKVTRVEPSLQAAFVD
YGGNRHGFLAFAEIHPDYYQIPLADRQALLKAEAEDHRRSDDFESADAPEPGAPAIDLSQ
VEQPDIGIVAASEATDVVVTEEAAPAAEEVSEEAAVVAVETVAEEAPAEEEKPKKRTRRP
RAKKKTAEEEAAAAEAAEASSEEDGSTGGEMAAMVDADTISEEVEGLRRGNDDDDDDDDD
DHHEKEVIESVGAEDAMEEVPDRVARKPRKQYRIQEVIKRRQILLVQVAKEERGNKGAAL
TTYLSLAGRYSVLMPNTARGGGISRKITQPADRKRLKEIARDLEVPQGMGVILRTAGANR
TRVEIKRDFEYLMRLWENVRTLTLNSTAPCLVYEEGSLIKRSIRDLYNKDIGEIIVSGEE
GYREAKDFMKMLMPSHAKVVQPYRDIHPIFSRSGIEAQLDRMLQPQVTLKSGGYLIINQT
EALVSIDVNSGRSTREHSIEETALTTNLEAAEEVARQLRLRDLAGLVVIDFIDMEEKRNN
RAVEKKLKDCLKNDRARIQVGRISHFGLLEMSRQRIRASVLESTTQVCQHCGGTGHVRSE
SSIALHVLRGIEEYLLRNTTHNITVRTTPETALYLLNHKRGTIVDYEGRFGVSIIIAADS
GVGAQHFAIDRGEAVENPVKIESLIQMLPNFAEEEDDIVIEAEEDEEEEEIVKAQASEPR
QQQGENGEEGKRKRKRRRRRRGKGGQNDQNGALDAQAGDDADDAEGDDDSAEADGDADEN
GVNEAANSDEDGKRKRRRRGKRGGRRNRDEALDAAEAEAGDDSETEGEEVSVAAPVAEEP
AATEVVEDAVADVVAEEAPKKPRRTRKAKAKTEAEEAPKAETVETVEPVIIEPAVVEATV
VDVAIEEVGEASADLAPETEAPATEEKTRANRGSNVSSSEPVVTSSGSSANPDGDEPKPR
KGGWWQRKGFF
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaatgcttatcgacgcctcccacgaagaggagacacgcgtagtcgttgtc
cgtgggaaccggatcgaagaattcgattttgaatcggagcacaaaaagcagatccgcggc
aatatctaccttgccaaggtcacgcgcgttgagccttcccttcaggcggccttcgtcgat
tacggtggaaaccgccacggctttctcgcttttgcggaaatccatcccgactattaccag
atcccgcttgccgaccgtcaagccctgctgaaagccgaagccgaggatcaccgccgcagc
gacgacttcgaatcggctgatgcgcctgaacccggtgcgccggccatcgacctttcgcag
gtggagcagcccgatatcggcatcgttgccgcaagcgaagccacggacgtcgtggtgacg
gaagaggccgcccctgccgccgaggaggtttccgaggaagctgcggttgtagccgtcgag
acggttgcggaagaagcacccgccgaggaagaaaagccgaagaagcgcacccgccgcccc
cgcgccaagaagaagacagcggaagaggaagccgcagcagccgaggccgctgaagcttct
tccgaagaagacggcagcaccggcggcgaaatggccgccatggtcgatgccgacacgatt
tccgaggaagtcgaaggccttcgccgtggcaacgacgatgatgacgacgacgatgatgac
gatcatcacgaaaaggaagtcattgaatccgttggcgccgaagacgccatggaagaggtt
cccgatcgcgtcgcccgcaagccgcgcaagcaatatcgcattcaggaagtcatcaagcgc
cgccagatccttctggtacaggtcgccaaggaagagcgtggcaacaagggtgccgcactt
accacctatctgtcgcttgccggccgttattccgtgctgatgccgaatacggcgcgcggc
ggcggcatttcccgcaagatcacccagccggccgaccgcaagcgcctgaaggaaatcgcg
cgcgatctggaggttccgcagggcatgggcgtcatcctgcgcaccgccggcgccaaccgc
acccgcgtcgaaatcaagcgcgacttcgaatatctgatgcgcctgtgggaaaacgtccgc
acgctgacgctgaattccacggctccctgcctcgtttacgaggaaggctcgctgatcaag
cgttcgatccgcgatctctataacaaggatatcggcgagatcatcgtttccggcgaagaa
ggctatcgtgaagcgaaagacttcatgaagatgctgatgccgagccatgccaaggtggtt
cagccttaccgcgacattcacccgatcttctcgcgctccggtatcgaagcccagctcgac
cgcatgctgcagccgcaggtgacgctgaaatccggcggttatctcatcatcaaccagacg
gaagcgctggtttcgatcgacgtcaactccggccgctcgacgcgcgagcattccatcgag
gaaaccgcgctgacgaccaacctcgaagcggcggaagaagtggcgcgccagctgcgcctg
cgcgaccttgccggtcttgtcgtcatcgacttcatcgacatggaagaaaagcgcaacaac
cgcgctgtcgagaagaagctcaaggattgcctgaagaacgaccgcgcccgcatccaggtc
ggccgcatctcgcatttcggccttctggaaatgtcgcgccagcgcatccgcgcttcggtg
ctggaatcgaccacccaggtctgccagcattgcggcggcacgggccatgtgcgctcggaa
tcctccatcgcgctgcatgttctgcgcggcatcgaggaatatctgctgcgcaacaccacc
cacaatattaccgtgcgcaccacgccggaaacggcgctctacctcctcaaccacaagcgc
ggcacgatcgtcgattatgaaggccgcttcggcgtgtcgatcatcatcgccgccgattcc
ggcgtcggcgcccagcacttcgccatcgatcgtggcgaagcggtcgaaaatccggtgaag
atcgaaagcctcatccagatgctgccgaacttcgcggaagaggaagacgatatcgtcatc
gaggccgaagaggacgaggaagaggaagaaatcgtcaaggcacaggcctccgagccgcgc
cagcagcagggcgagaacggcgaagaaggcaagcgcaagcgcaagcgccgtcgccgccgc
cgcggcaagggcggacagaacgaccagaacggtgcgcttgacgcacaggccggcgatgac
gctgacgatgccgaaggtgacgacgacagcgccgaagccgatggtgatgccgacgaaaac
ggcgtgaacgaagccgcaaactccgacgaagacggcaagcgcaagcgccgtcgccgcggc
aagcgtggcggccgccgcaaccgtgacgaagctctcgacgccgccgaagccgaggctggc
gacgacagcgagacggaaggcgaagaggtttccgtcgcagcacccgtagcggaagaacct
gccgccaccgaagtggtggaagatgcggttgccgacgtcgtcgcggaagaagcaccgaaa
aagccgcgccgtacccgcaaggcgaaagccaagaccgaagccgaagaagcgccgaaggct
gaaaccgtcgaaacggttgagccggtgatcatcgagccggccgtcgttgaagcaaccgtc
gtcgatgtcgccatcgaagaggttggtgaagcctcggctgatctggcgcctgaaacagag
gcaccggcaacggaagaaaagacccgcgcgaaccggggcagcaatgtctccagttccgaa
ccggtcgtcacctcttccggttcgtccgcaaaccccgacggcgacgagccgaagccgcgc
aagggcggctggtggcagcgcaaaggcttcttctga
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