KEGG   Rhizobium rhizogenes K599: B0909_12945
Entry
B0909_12945       CDS       T04767                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
aro  Rhizobium rhizogenes K599
Pathway
aro03030  DNA replication
aro03410  Base excision repair
aro03420  Nucleotide excision repair
aro03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B0909_12945
   03410 Base excision repair
    B0909_12945
   03420 Nucleotide excision repair
    B0909_12945
   03440 Homologous recombination
    B0909_12945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aro03032]
    B0909_12945
   03400 DNA repair and recombination proteins [BR:aro03400]
    B0909_12945
Enzymes [BR:aro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B0909_12945
DNA replication proteins [BR:aro03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B0909_12945
DNA repair and recombination proteins [BR:aro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     B0909_12945
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B0909_12945
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5 HHH_2 HHH IMS_HHH Transposase_20
Other DBs
NCBI-ProteinID: AQS63021
LinkDB
Position
1:2777844..2780843
AA seq 999 aa
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDLYKANRTAPPEDLVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGIPDVIEKWGVGPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAAEIKQQKRRENIIANA
DLARLSRQLVALRTDVPLEQSLEALVLEPQNGPKLIAFLKAMEFTTLTRRVAEATETDAS
AIDPASVPVQWGADAHGPDLDAPAAAGKAGEVAADATGVSASAAAPARKLFGEGSTPADL
AAARQALFSAARIDTSAYTTIRDLATLDRWIAAARETGVVAFDTETTSLDPMQAELVGFS
LAIADNGKDASGTDIRAAYIPLTHKTGSGGDLFSDGIRLAEGQVPFTEALERLKNLLEDP
AVLKIAQNLKYDYLLMKRHGVVMQSFDDTMLISYVLEAGKATHGMDSLSERWLGHTPIAY
KDVAGSGKSSVTFDFVDIDKATAYAAEDADVTLRLWMALKPRLAAERLTSVYERLERPLV
PVLAHMEERGITVDRQILSRLSGELAQKAASFEEEIYELAGERFNVGSPKQLGDILFGKM
GLPGGSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPGYIHPETK
RVHTSYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRV
LAHVADIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGL
ANQLSIARSEASDYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSNP
SVKAFNERAAINAPIQGSAADIIRRAMVRIEPALEAEKLSARMLLQVHDELIFEVEEAEI
EKTLPVVVSVMENAAMPAISMKVPLQVDARAADNWDEAH
NT seq 3000 nt   +upstreamnt  +downstreamnt
atgaaaaaaggcgatcatcttttcctcgttgacggttccggtttcattttccgggccttc
catgccatcccgccgctgaaccgcaagtcggacgggctgccggtcaacgccgtttccggc
ttctgcaacatgttgtggaagctcctgaaggatgcgcgcaataccgatgtcggcgtgacg
cccacccattttgcggtgatttttgactattcgtcgaaaaccttccgcaacgagctttac
gatctctacaaggccaaccgcacggcgccgccggaagatctggttccgcaattcggcctg
atccgcgaggcgacgcgcgccttcaacctcccgtgcatcgagacggaaggctttgaggcg
gatgacatcattgccacctatgcccggcaggccgaggcgatcggcgctgacgtcaccatc
atctcttccgacaaggatctgatgcagctcgtcacggccaatgtgcatatgtacgacgcc
atgaaggacaagcagatcggcatccccgacgtcatcgaaaaatggggcgtcggcccggaa
aagatgatcgaccttcaggcaatgaccggcgattccaccgacaatgtcccgggcattccc
ggtatcggcccgaagacggcggcgcagttgctggaggaatatggcgatctcgatacgctg
ctggcgcgggcagctgaaatcaagcagcagaagcgccgggaaaatatcatcgccaatgcc
gatcttgcccgtctttccaggcagctcgtggcgctcaggaccgatgtgccgctggagcag
tctcttgaggcactggtgcttgaaccgcagaacggcccgaaactcatcgctttcctgaaa
gcgatggagttcacgacgctgacccgccgcgttgcggaggcgaccgaaaccgacgcgtcc
gccatcgacccggctagtgtgccggtgcaatggggtgccgatgcccatggtcccgacctc
gatgcgccggccgctgccggcaaggctggtgaggttgccgctgacgcaacgggtgtttcg
gcttcggcggccgctccggcacgcaagctgttcggggaaggcagcacacccgccgatctc
gccgcagcacgtcaggcgcttttttcagccgccaggattgatacgagcgcctacacgacc
atcagggacctcgcgacactggaccgctggattgcggcagcccgtgaaacaggtgtcgtt
gcattcgatacggaaacgacttcgcttgatccgatgcaggcggaacttgtcggtttttcg
ctggcgattgccgataatggcaaggatgcttcgggcaccgatatccgcgcggcctacatt
cctttgacgcacaagaccggttcgggtggtgatcttttcagcgatggcatcaggcttgcc
gaagggcaggtgccgtttaccgaggcgctggagcgtctgaagaaccttcttgaggacccg
gcggttttgaaaatcgcccagaacctcaaatatgactatctgctgatgaaacgccacggc
gtcgttatgcagagtttcgacgacacgatgctgatttcctacgtgcttgaagccggcaag
gccacacatggcatggattcgctgtccgaacgctggctcggccacacgccgatcgcttac
aaggacgtggcggggtcgggcaagtcgagcgtcaccttcgatttcgtcgatatcgacaaa
gcgacggcttatgcggcggaagacgcggatgtcaccttaaggctgtggatggccctgaaa
cccaggctcgccgccgagcgtctgaccagcgtgtatgagcggctggagcgtccgcttgtg
ccggttctggcgcatatggaagaacgcggcatcaccgtcgaccggcaaatcctctcgcgc
ctttccggcgaactcgcccagaaggccgcgtccttcgaagaggaaatctacgagctggcg
ggcgagcgttttaacgtggggtcgccaaagcagctcggcgatatcctgttcggcaagatg
ggcttgcccggtggctcaaaaaccaagaccggccaatggtcgacatcggcgcaggttctg
gaggatctggcggcggaaggtgccgaactgccgcgcaagatcgttgactggcggcagctg
accaagctgaaatcgacctatacggatgcgctgcccggttatattcatcccgagacgaag
cgggtgcatacatcctacgcgcttgcctccacgaccacggggcgtctgtcgtcctcggaa
ccgaaccttcagaatattccggttcgcacggcggaaggccgcaagatccgcacggctttc
atttccacgcccggtcacaagcttctgtctgccgactacagccagatcgaactgcgcgtg
ctggcccatgtcgccgatattccgcagctgcgcaacgctttcgaaaacggcatcgacatt
catgcgatgacggcatccgaaatgttcggcgtgccggtggaaggcatgccatcggaggtg
cgccgccgcgccaaggccatcaacttcggcatcatctacggcatttccgcctttggcctt
gccaaccagctgagcatcgcccgctcggaggcgagtgattatatcaagaaatatttcgag
cgttttcccggcattcgcgattacatggaagcgaccaaggctttcgcccgcgagaatggc
tatgtcgagacgatctttggtcgccgcgcccattatcccgaaattcgttcctccaaccct
tccgtgaaagccttcaacgagcgcgcggccatcaatgcgccgatccagggttcggccgcc
gatatcatccgccgtgccatggttcgcatcgagccggcgctggaagcggagaagctttcc
gcccgcatgcttttgcaggtacacgacgaactcatcttcgaagttgaggaagcggaaatc
gaaaagactttgccggtggtggtttctgtcatggaaaatgccgccatgccggcgatttcc
atgaaggtgccgttgcaggtggatgcgcgtgcggccgataattgggacgaggcgcattga

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