Rhizobium rhizogenes K599: B0909_13080
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Entry
B0909_13080 CDS
T04767
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aro
Rhizobium rhizogenes K599
Pathway
aro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0909_13080 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aro03019
]
B0909_13080 (pnp)
03016 Transfer RNA biogenesis [BR:
aro03016
]
B0909_13080 (pnp)
Enzymes [BR:
aro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B0909_13080 (pnp)
Messenger RNA biogenesis [BR:
aro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B0909_13080 (pnp)
Transfer RNA biogenesis [BR:
aro03016
]
Prokaryotic type
tRNA degradation factors
B0909_13080 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AQS63044
UniProt:
A0AAN2DDY1
LinkDB
All DBs
Position
1:complement(2749283..2751430)
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AA seq
715 aa
AA seq
DB search
MFNQHSVEIEWAGRPLKLETGKVARQADGAVIATYGETMVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDILSMVATSAALTLSGIPFMGPIGGARVGYINGEYVLNPHLDEMDESTLDLVVA
GTSDAVLMVESEAKELNEDVMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPREFEPEDFSA
LENEMLGLAEAELRDAYKITEKAARYAAVDAVKAKVKAHFLPEEGEAKYTPEEIGAVFKH
LQAKIVRWNVLDTKSRIDGRDLSTVRPIISEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKIALEQAQGGRKHILGEMAN
AITESRSQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEVGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEVVADKKKEDGEAAAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcaacactccgtggaaatcgaatgggcaggccgcccgctgaagctcgagacc
ggcaaggtcgcccgtcaggctgatggcgccgtcatcgcaacctacggcgagacgatggtt
ctcgcgaccgtggtttccgcaaagtctccgaagccgggtcaggacttcttcccgctcacc
gtcaactaccaggaaaagacctacgcagccggcaagatccccggcggctacttcaagcgc
gaaggccgcccgagcgaaaacgagaccctcgtttcgcgcctgatcgaccgtccgatccgc
ccgcttttccctgaaggctacaagaacgacacgcaggttgtcgtgaccgtcatccagcac
gatctggaaaacaaccccgacattctgtcgatggtcgccacttcggcagcgctgaccctt
tcgggcattccgttcatgggtccgatcggcggcgcgcgcgttggttacatcaacggcgaa
tatgttctgaacccgcatctggacgagatggacgaatccacgctcgatctggttgtcgcc
ggcacctccgacgccgttctgatggttgaatcggaagccaaggaactcaacgaagacgtc
atgcttggcgccgtcatgttcggccacaagggcttccagccggttatcgacgcgatcatc
aagctcgccgaagttgccgccaaggaaccccgtgaattcgaaccggaagatttctccgcg
ctcgaaaacgagatgctgggcctggccgaagccgaactgcgcgacgcctacaagatcacc
gaaaaggctgcccgttacgctgccgtcgacgccgtgaaggcgaaggtgaaggcacacttc
ctgccggaagaaggcgaagccaaatacacgccggaagaaatcggcgctgtcttcaagcac
cttcaggcaaagatcgttcgctggaacgttctcgacaccaagagccgtatcgatggccgc
gacctgtcgaccgttcgtccgatcatctcggaagtcggcctgctgccgcgcacccacggt
tcggcgctgttcacccgcggtgaaacccaggcgatcgttgttgcgacgctcggcaccggc
gaagacgaacagtatgtcgacagcctgaccggcatgtacaaggaacgcttcctgctgcat
tacaacttcccgccctactcggtcggtgaaacaggccgcatgggctccccgggccgtcgc
gaaatcggtcacggcaagctcgcatggcgcgctatccgcccgatgctgccgactgcggaa
cagttcccctacacgctgcgcgtcgtttccgaaatcaccgaatccaacggctcctcgtcg
atggcaacggtttgcggcacctcgctcgcactgatggacgccggcgttccgctggccaag
ccggttgccggtatcgccatgggcctgatcctcgaaggcgagcgctttgcggttctctcc
gacattctcggtgacgaagaccacctcggcgacatggacttcaaggttgcgggtacggcc
gacggcatcacctcgctgcagatggacatcaagatcgccggtatcaccgaagagatcatg
aagatcgctctggaacaggcacagggtggccgcaagcacattctcggcgaaatggccaac
gccatcaccgagagccgcagccagctcggcgaattcgcaccgcgcatcgaagtcatgaac
attccggtcgacaagatccgtgaagtcatcggttccggcggcaaggtcattcgcgaaatc
gtcgaaaagaccggcgcgaagatcaacatcgaagacgacggcaccgtcaagatcgcttct
tcttccggcaaggaaatcgaagcggcccgcaagtggatccactccatcgttgctgaaccg
gaagtcggccagatctacgaaggcacggtcgtgaagaccgccgacttcggcgctttcgtc
aacttcttcggcgcccgtgacggcctcgtccacatctcgcagctcgcttccgagcgtgtc
gccaagacttccgacgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggcttc
gacgagcgtggcaaggttcgcctgtccatgaaggttgtcgaccaggcaaccggcaaggaa
gtcgttgccgacaagaagaaggaagacggtgaagccgctgccgaataa
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