Rhizobium rhizogenes K599: B0909_26280
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Entry
B0909_26280 CDS
T04767
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aro
Rhizobium rhizogenes K599
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aro03032
]
B0909_26280 (gyrB)
03400 DNA repair and recombination proteins [BR:
aro03400
]
B0909_26280 (gyrB)
Enzymes [BR:
aro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B0909_26280 (gyrB)
DNA replication proteins [BR:
aro03032
]
Prokaryotic type
DNA Topoisomerases
B0909_26280 (gyrB)
DNA repair and recombination proteins [BR:
aro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B0909_26280 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AXO68465
UniProt:
A0AAN2DE24
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All DBs
Position
1:2672431..2674866
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AA seq
811 aa
AA seq
DB search
MTETSSSGVGANTEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADLVTVTLNADGSVTVTDNGRGIPTDIHSSEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLRIRRNGKLHEIGFTHGVADAPLSVIGEYEGRSGTEVTF
LASPETFTMTDYDYATLEHRLRELAFLNSGVRILLTDKRHSDVKQEELLYDGGLEAFVRY
LDRSKKPLVDKPVAIRGEKDGITVEVALWWNDSYHENVLCFTNNIPQRDGGTHMAGFRAA
LTRQVTSYAETSGILKKEKVSLQGEDCREGLTAILSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWLEEHPSDAKILVGKVVEAAVAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSELFLVEGDSAGGSAKQGRSRETQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTSIGKDEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVTRGKSVQYLKDEKALEEYLISMGIEEASLTLGSGEVRVGADLREAILDAVR
MRSLIDGLHSRYNRSIVEQAAIAGALNPELSADAARAEETVTEVARRLDMIAEETERGWS
GTVLEDGGLRFERMVRGVKEVSTLDMGLLGSADARHIDQLAVRSRDIYATPPVLQRKDGS
MELAGPRALLDAIFAAGRKGLSMQRYKGLGEMNAEQLWETTLDANVRSLLQVRVSDATDA
DGLFARLMGDEVEPRRDFIQENALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaacatcgtcaagcggagtcggcgcgaacaccgaatatggagccgattctatc
aaggtcctcaagggtcttgatgccgtgcgcaagcggcccggcatgtatatcggtgatacc
gatgacggttccggcctgcaccacatggtctacgaagtggtcgacaacgccatcgacgag
gcgcttgccggtcatgccgatctggtgacggtgacgctgaacgccgacgggtcggtgacg
gtcacggataacgggcgcggcattccgaccgatatccactcttccgaaggcgtttccgcc
gccgaagtcatcatgacgcagctgcacgcgggcggaaagttcgaccagaattcctacaag
gtgtccggcggtctgcatggcgtgggcgtctcggtggtcaatgcgctctcggtctggctg
aagctccgaatccgccgtaacggcaagctgcatgagatcggcttcacccatggtgtcgcc
gacgcgccgctttccgtcattggcgaatatgaaggccgctcgggcacggaagtcaccttc
ctcgcgagccccgaaaccttcaccatgacggactatgattacgccacgctcgagcaccgc
ctgcgcgaactggcatttctgaattccggcgttcgcattctgctcaccgacaagcgtcat
tcggacgtaaaacaggaagagctgctttatgatggcggcctggaagctttcgtccgttat
ctcgatcgctccaagaagccgctggtggacaagcccgttgccatcaggggcgagaaggac
ggtatcaccgtcgaggtcgcgctctggtggaacgacagctaccacgagaacgtgctttgc
tttaccaacaacattccccagcgcgacggcggcacgcatatggccggtttccgcgcggcg
ctcacccgccaggtgacttcctatgccgaaacatccggtattctgaaaaaggaaaaggtc
agcctgcagggtgaggattgccgtgaaggcctgacggccattctttccgtcaaggttccc
gatcccaagttttcctcgcagacgaaggacaagcttgtttcgtccgaagttcgcccggtc
gtggaaagccttgtcaacgaagccctgtccacctggctggaagaacatccttccgacgcg
aaaatcctcgtcggcaaggttgtggaagcggctgtcgcccgcgaggctgcccgcaaggca
cgcgaactgacgcgccgcaagggcgctctcgatatcgcttcgcttcccggcaaacttgcc
gactgctccgagcgtgatccggcgaaatccgaacttttcctcgtcgagggcgattccgcc
ggcggttccgccaagcagggccgctcgcgcgaaacccaggcgatcctgccgctgcgcggc
aagatcctgaacgtcgagcgcgcccgtttcgataagatgctgtccagccaggaaatcggc
acgctgatcacggcgctcggcacgtccatcggcaaggatgaattcaacgccgacaagctg
cgttaccacaagatcatcatcatgacggatgctgacgttgacggcgcccacatccgcacc
ctgctgttgaccttcttcttccgccagatgccggagctgatcgagcgtggccatctctat
atcgcccagccgccactctataaggtcacgcgcggaaaatccgtgcagtatctgaaggac
gaaaaggcactggaagagtatcttatctccatgggtatcgaggaggcgtcgctgaccctc
ggctccggggaggtccgggtcggtgccgatctgcgcgaggccattctggatgcggtgcgc
atgcgctcgctgatcgacggactgcattcgcgttataatcgctcgattgtcgaacaggcg
gccattgccggcgcgctgaaccccgagctttcggccgatgccgcccgcgctgaggaaacc
gtgaccgaagtggcgcggcgactggacatgatcgcggaggaaaccgagcgtggttggtcc
ggcacggtgctggaagacggcggtctgcgtttcgagcgcatggtccgcggcgtcaaggaa
gtctcgacgctggatatgggcctgctcggttcggccgatgcccgccatatcgaccagctc
gctgtccgctcgcgtgatatctacgccacgccgcccgtgctgcagcgcaaggacggtagc
atggagctggccggaccgcgggcgcttctggatgcgattttcgctgccggccgcaagggt
ctctccatgcagcgttacaagggccttggcgagatgaatgccgaacagctgtgggaaacc
acgcttgacgccaatgtccgctctctgctgcaggtgcgggtgagtgatgcgaccgacgcc
gatggcctgttcgcccgcctgatgggcgacgaagtggaaccgcgccgcgacttcattcag
gaaaatgccctcagcgtcgctaacctcgacatttaa
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