Rhizobium rhizogenes K599: B0909_26335
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Entry
B0909_26335 CDS
T04767
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aro
Rhizobium rhizogenes K599
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aro03400
]
B0909_26335 (addA)
Enzymes [BR:
aro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0909_26335 (addA)
DNA repair and recombination proteins [BR:
aro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B0909_26335 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
NPHP3_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AXO68475
UniProt:
A0AAN2A524
LinkDB
All DBs
Position
1:complement(2684405..2687962)
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AA seq
1185 aa
AA seq
DB search
MTIDPFDAGPAADTPESWIDWTSARQRLASDPSSSAWVSANAGSGKTHVLTQRVIRLLLA
GCRPSAILCLTYTKAAASEMSSRVFDRLAEWATLPDSDLKDRITAIEGRAPDRIKLAEAR
RLFAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAATALLAEARRSLLT
AVSTERDAELAQSLAYVLDLADESGLESLLSAIIANRSALRGFLLDAKQSGGIDARLRQA
MKIADGETEETAAAAFWPLPGLSGLALDTYLTLADEVGGSRVIDVAYALREAKRQSDPVR
RMEFIEAALLTAKGEKKSDTYVINKGMQKSAPDLVDALTLARDHVVACRNRYRLMRMLAA
TKCALILAERLIGDFEDLKKQRSQLDFEDLIERAANLLNRDTAGAWVHYKLDQGIDHILV
DEAQDTSPVQWSIIQSLAADFFTGESARMGQRTLFAVGDEKQSIYSFQGARPERFSQERD
ETKRRVDSVEQAFHRIRLPLSFRSTEDVLAAVDQVFSIPQNASGLSADNEPVEHRSNRAG
HPGTVEVWDMVAPETTEDEEDWTAPFDALRESAPATIVARRIAARIADMIGRETIIEKGV
ERAVEPGDILVLVRKRHAFVNALTRELKRRKNIPVAGADRLRLTDHIAVQDLLALGRFVV
LPEDDLSLAALLKSPLFNLTEDDVFEIAAARTETESVWWRLQMLSQKENSHLSVVTGKLQ
NFIALSKTATVHDFFAAVLTLHDGRKKFLGRLGNEASDVLDEFLSFALDHERTGLPGLQA
FLSVLETDSPEVKREQDKDRGEVRIMTVHASKGLEAPVVFVVDGGSKAFNHSHVPKLRFI
EAGEDTFPVWLPGSGFSNHLIRSDEERLKTAAEDEYRRLLYVAMTRAADHLVVCGYRGQK
ENPECWHTIVKAALTDNQDHCRPQVFVADGEEWQGLVWRKSEPRPASTPQMLPETQQEEN
HALPAGLLAPLPALPALPRPLSPSGAGTIIDDGADDLAVRSPLFGEKAEASSLALQRGRL
VHRMLQALPDFTENEREEAARRYAERAARFWPAAEREHLIQAVLRVLSEPAVQPAFSANS
RAEISIMGTMTIGRQQYAVSGRIDRLAVEGNRVILVDYKTNRVPPREAREIPFSHVAQLA
IYREILAPLYPGKEFVCALIYTENAAFVRVDDDAMAEALAAIKTK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgaccccttcgacgccggccccgccgctgacacgcctgagagctggatcgac
tggaccagcgcgcggcagcggcttgcctccgatccgtcgagctccgcctgggtgtccgcc
aatgccggctcgggcaagacccatgtgctgacccagcgtgtcatccgcctgcttctggcc
ggatgccgtccctccgcgatcctctgcctcacctataccaaggctgccgcatcggaaatg
tcgagccgtgtcttcgaccgcctggcggaatgggctactttgccggattccgatcttaag
gaccgtatcaccgccattgaaggaagagcgccagatcgcatcaagcttgcggaagcgcgc
aggctgttcgccaaggcgctggaaacgcccggcggcctgaaaatccagaccatccacgct
ttctgcgaggcgctgctgcatcagtttccgctggaggccaatgtcgccggtcatttttcc
gtgctcgatgaccgcgccgcaaccgccctcctggctgaagcacgccgttcgcttctgacg
gcggtttcgacggagcgcgatgcggaactggcccagtcgctggcctatgtgctcgatctc
gccgacgaaagtgggctggaatcgctgctctccgccatcatcgccaatcgcagcgccctt
cgcggttttctgctcgacgccaaacaatctggcggcattgatgcccggctgcggcaggcg
atgaagatcgcagatggagagaccgaagaaacggcagcggcggccttctggcccttgccc
ggcctctccgggctcgcactcgatacctatctgacacttgcagacgaggtcggcggatcg
cgtgtcatcgatgtcgcttacgccctcagggaagcgaaacggcagtcggacccggtgcgg
cggatggaattcatcgaggccgcactgctgacggccaagggcgaaaagaaatcggatacc
tatgtcatcaacaagggcatgcagaaatccgctcctgatcttgtcgacgcattgacgctg
gcgcgcgaccatgtggttgcctgccgcaaccgttaccgtctgatgcggatgctggcggcg
accaaatgcgcccttattctggccgaacggctgatcggtgatttcgaggatttgaaaaag
cagcgcagccagctcgatttcgaggatctgatcgagcgcgccgccaatctgctcaaccgc
gatacggcgggtgcatgggtgcattacaagctcgatcagggcatcgaccatattctcgtt
gacgaggcacaggatacgagcccggtgcaatggtcgatcatccagtcgctggcggcggat
ttcttcaccggcgaaagcgctcgcatggggcagcggacgctgtttgccgtgggtgatgaa
aaacagtcgatctactccttccagggagcgcggccggaacggttctcgcaggagcgcgac
gagaccaaaaggcgcgtcgattcggtggagcaggcttttcaccgcatccgcctgccgctt
tctttccgctccacggaagatgtgctggccgccgtcgatcaggtcttctcgatcccgcaa
aatgccagcggcctcagcgccgataatgagccggtggagcaccgctccaaccgcgccggc
catcccggcaccgtggaagtctgggacatggtggcgcccgaaaccactgaggacgaagag
gactggacggcgcctttcgatgcgctgcgggaaagcgcgccggccaccatcgtcgcgcgt
cgcatcgccgcacgcatcgccgacatgatcggacgtgaaaccatcattgaaaagggcgtg
gaacgggctgtcgagccgggtgacattctggtgctggtgagaaaacgccatgccttcgtc
aacgcgctaacccgtgaactgaagcggcgcaagaatattcccgttgccggtgccgaccgt
cttcgtctgacagaccatattgccgtgcaggatctcctcgcactcggccggttcgtggta
ctgcctgaggacgatctgtcgcttgccgcactcttgaaaagcccgcttttcaacctgacg
gaagatgacgtcttcgagatagccgccgcgcgaaccgagacggagagcgtgtggtggagg
ctgcagatgctttcacagaaagaaaatagccacctttccgtcgttaccggcaaactgcaa
aacttcatcgcgctctctaaaacagccaccgtgcatgacttcttcgcggcggttctgacg
ctgcatgacggacgcaagaagtttctcggaaggcttggcaacgaagcaagcgacgttctg
gatgaattcctgtcctttgcactggaccacgaaagaacggggctgcccggcctgcaggcc
tttctttccgttctggagaccgattcgccggaagtgaagcgcgagcaggacaaggatcgc
ggcgaagtgcgcatcatgaccgtgcatgcttccaaggggttggaagcgccggtcgttttt
gtcgtcgatggcggctcgaaggccttcaatcacagccatgtgccgaaactgcgcttcatc
gaggctggcgaagacactttccctgtctggctgcccggcagcggcttctccaaccatctc
atccgctcggatgaagaacggctgaagacggctgcggaagatgaatatcgccggctgctt
tatgtggcgatgacccgtgccgccgatcatctggtcgtctgcggttatcgcggccagaaa
gaaaaccccgaatgctggcacaccatcgtcaaggcggcgcttacagacaatcaagaccat
tgccggccgcaggtgttcgtggccgatggcgaggagtggcaggggcttgtgtggcgcaag
tccgagcctcgtccggcatccaccccgcaaatgttgccggagacgcagcaggaggagaac
cacgctcttccggcggggcttctcgcccccctgccggccctgcccgctctgccaagaccg
ctcagcccttccggcgcaggcaccatcatcgatgacggcgcggacgatctggctgtgcgt
tcaccgttgttcggagaaaaagcggaggcatccagccttgccttgcagcgcggccggctg
gtgcatcgcatgctgcaggccctgccggattttacggagaatgagcgcgaagaggcagcc
cgccgttatgcggagcgagcagcccgtttctggcccgctgccgagcgcgagcatttgata
caggcggttttgcgggttctgtctgaaccggcggtgcaaccggccttctccgccaacagc
cgtgcggaaatatcgatcatgggcacgatgacgatcggcaggcagcaatatgccgtctcc
ggccgcatcgaccggctggcagtggaaggcaaccgcgtcattcttgtcgattacaagacg
aaccgcgttcccccacgtgaagcacgcgagatccccttctcccatgtcgcgcagcttgca
atttatcgtgaaattctggcaccgctctatcccggcaaggaatttgtctgcgcgctgatc
tatacggaaaatgccgcttttgtacgggttgacgacgatgccatggcggaggcccttgcc
gcaataaagacaaagtga
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