Rhizobium rhizogenes K599: B0909_26340
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Entry
B0909_26340 CDS
T04767
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aro
Rhizobium rhizogenes K599
Brite
KEGG Orthology (KO) [BR:
aro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aro03400
]
B0909_26340 (addB)
Enzymes [BR:
aro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0909_26340 (addB)
DNA repair and recombination proteins [BR:
aro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B0909_26340 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AXO68476
UniProt:
A0AAN2A4A3
LinkDB
All DBs
Position
1:complement(2687952..2691137)
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AA seq
1061 aa
AA seq
DB search
MTLTHHAKRVLTIAAGTPFLKTLAETLCDGRLTADYRYDPADPLSLAKVTIYVPTRRSAR
VLRSEFVDLLGGRSAILPLIRPLGETDDDSGFFDIENPEIMDLAPPISDTGRLIELARLI
LAWRNSLPDAIRAVHLDSPLVAPASPADAIWLARALGEVIDAMDTEEKDWEALQHLDTGD
HAQWWQLTADFLKIASVFWPARLAELNRSSAGRHRNAILRAEANRLANLPDTGPVIVAGS
TGSIPAAADLIAAVAALPQGTVVLPGLDLAMPEEQWQAIAEDPTDPSSRTHSQYGLYMLL
QKLGILRDDVVQIGAIDSDLEKRAAVFSAALAPAKSTSDWNRWREDREPCFFNAAFATAT
LIEAANEREEATAIAVALRLALEAPGAERPSQAALITPDRGLARRVATELQRFGIEADDS
AGTPLSATPQAGLTQLALEAILRPGDPVPIISLLKHPLARFGLSADAFAQAAKALELIAL
RGGRVETGIGDLEAVLDAQLLAQRDDRHPPAWRLALPEASTEAARDLARRIAVATEPLGS
AFVRRDRSGRAFTDKLALSDWAERTGRVIEAICADDTNDLATLWSGEAGDKLSSLFAELM
ESGEILDADGPQWIDIFAALVAGESIKPRSMRHPRIFIFGALEARLQSVDTVVIGGLNEG
LWPGQTANNPFLSRTMKTAIGLEPPERRIGQLAHDFEMANGTRQIFYTRALRQGSTPAVA
SRWLQRLLALGGEDFAGELRKRGETYRHWAGLMDESIDQEAAKRPAPKPPAALQPTRYSF
SEVGRLRRDPYSIYARRILKLDPLDPFNRDPNAADRGTLYHTIIERYSREGHIPGTPASL
EAMQRILDECFDAENLPPHVDVIWRPRFAAVARAFIDWEKERHPAIRHSFFEARAGQEIT
EAGIRLTGIADRIDIKTNGQADVIDYKTGLAPSVNQARALLDPQLALEAAALMRGAFREA
GSPTPENLIYVRLRPGERFFADQVNNEHSSRSGKRPPKSAIELATESIEQLARFVRSLRE
GENGFASRLVPEEQQSYGGEYDHLARVSEWSTAEPGDGDDD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcacccaccacgcaaagcgcgtcctgacgatcgccgcgggaacaccgttcctc
aaaacgctcgcggaaacgctgtgtgacgggagactgacagccgactatagatatgatcca
gccgatccgctttcactggccaaggtgacgatctatgtgccgacgcggcgctcggcccgc
gtgctgcgctccgaattcgtcgatcttctcggcggccggtccgccattctgccgctgatc
cggccactgggcgaaacggatgacgatagcggctttttcgatatcgaaaatcccgagatc
atggacctcgcaccgccgatttccgacaccggccggctgatcgaactcgcacgtctcatc
ctggcctggcgcaacagcctgccggacgccatccgggctgtccatctggattcaccgctc
gtcgctcccgccagcccggccgatgccatatggctggcgcgtgcgctcggcgaggtgatc
gatgccatggacacggaagaaaaggactgggaggcgcttcagcatctcgataccggcgac
cacgcgcaatggtggcagctgacggcggatttcctgaagatcgccagcgtcttctggccc
gctcgtcttgccgagctcaaccggtcgtccgccggccggcatcgcaacgccatcctgcgg
gcggaggcgaaccggcttgcaaatttgccggatacgggaccggtcatcgtcgcagggtcg
acgggctccattcctgcggcagccgatcttatcgccgccgttgccgccctgccccaaggc
actgtcgtgcttccggggctcgaccttgccatgcccgaggagcaatggcaggcgattgcc
gaagatcctaccgatccttcgagccgcacgcattcgcaatacgggctctatatgctgctg
cagaagctcggtatcctgcgcgacgacgtggttcagatcggcgccatcgacagcgatctc
gaaaaacgcgcagccgtgttttctgccgcactcgcaccggccaaatccaccagcgactgg
aaccgttggcgcgaagacagggaaccctgctttttcaacgcggctttcgcaacggccacg
ttgattgaagccgccaacgagcgcgaggaggcaaccgccatagccgtggcgctcaggctg
gcgctggaggccccgggcgcggaacgtccttcacaggcggcattgataacacccgaccgc
ggactggcgcggcgcgtggcaaccgagctgcagcgcttcggcatcgaggcggacgattcc
gctggtacgccgctttccgccacaccgcaggcggggctgacacaattggcactggaggca
atcctcaggccgggagacccggtgccgatcatttcgcttttaaaacaccccctcgcccgc
ttcgggctctccgcggatgctttcgcacaggcagcgaaagcgctggagctgatcgcgctg
cgtggcggcagggtcgagacggggatcggcgatctggaagcggttctcgatgcgcagctt
ctggcgcagcgcgatgaccggcacccccccgcctggcggctggcgctgccggaggccagc
acggaagccgcgcgcgatctggcacggcggatcgccgttgcgaccgagccgcttggctct
gcctttgtccgtcgggatcgatccggccgcgccttcaccgacaaactggcactttccgat
tgggcagagcggacaggtcgcgtgatcgaagccatctgtgcggatgataccaacgatcta
gccacgctctggtccggtgaggcgggagacaagctctccagcctctttgcggaactgatg
gaaagcggcgaaatcctcgatgcggacggaccgcaatggatcgatattttcgcggcgctg
gtggccggtgaatcgatcaagccgcgatccatgcgccatccgcgtattttcatcttcggt
gcgcttgaggcacggctgcagagcgtcgacaccgtcgtcatcggcggtctcaatgaaggg
ctctggccgggccagacagcgaataatccgttcctgtcccgcaccatgaaaaccgctatc
gggctggagccgccggaacgtcgtatcggccagctggcgcatgacttcgagatggccaat
ggtacgcgacagatattctatacccgtgcgctcaggcagggctccacacctgccgtcgct
tcgcgctggctgcaacggctgctggctctgggcggtgaggattttgccggagaactcagg
aaacgcggcgagacctatcggcattgggccggcctgatggatgaaagcatcgatcaggag
gccgccaagcgccctgcgccgaaaccgccggccgctctgcagccgacgcgctattccttc
agcgaagtgggacggctgcggcgcgatccctattcgatctatgcgcggcgcattttgaag
ctcgaccctctcgatccgttcaaccgcgatcccaacgccgccgaccgcggcacgctctat
cacacgattatcgagcgttattcccgcgaggggcatattcccggcacaccggcttcgctt
gaggcgatgcagcgcattctggacgagtgtttcgatgcggagaacctgcccccgcatgtg
gatgtcatctggcggccacgctttgcagcggtggcccgcgccttcatcgactgggagaag
gaacgccatccagccattcgccacagtttttttgaagcgcgcgccggacaggaaatcacc
gaggcgggcataagactgaccggcattgccgaccggatcgacatcaaaaccaacggtcag
gcggatgttatcgactacaagaccgggcttgcgccatccgtcaatcaggcgcgtgcgcta
ctcgacccgcagcttgcgctggaagcggcggcactgatgcgcggtgcgttccgcgaagcc
gggtcacccacgcctgaaaaccttatctatgtacgtctgcggccgggcgagcgcttcttt
gccgatcaggtcaataacgaacattccagccgaagcggcaagagaccaccaaaatcagcc
attgaactggcgaccgaatcgatcgaacagctcgccaggttcgtccgctcgctgcgtgaa
ggcgagaatggttttgcctcacggctggtgccggaagagcagcaatcctatggcggggaa
tatgatcacctcgcccgcgtttcggaatggtcgacggcagaaccgggagacggcgatgac
gattga
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