Athalia rosae (coleseed sawfly): 105682919
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Entry
105682919 CDS
T09776
Name
(RefSeq) high mobility group protein DSP1 isoform X1
KO
K10802
high mobility group protein B1
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03410
Base excision repair
aroa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105682919
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105682919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aroa03036
]
105682919
03400 DNA repair and recombination proteins [BR:
aroa03400
]
105682919
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aroa04147
]
105682919
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
105682919
DNA repair and recombination proteins [BR:
aroa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105682919
MMR (mismatch excision repair)
Other MMR factors
105682919
Exosome [BR:
aroa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
105682919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
TFIIA
Motif
Other DBs
NCBI-GeneID:
105682919
NCBI-ProteinID:
XP_012250581
LinkDB
All DBs
Position
5:428791..438261
Genome browser
AA seq
432 aa
AA seq
DB search
MSEHHRVGGGWGTASPGTREDGSGGPVWWPAGLNAVSPEQQQQNLQQHHQHLINQQQQQQ
QQQQQQQQQQQQQQQQQLSQHHQDIVRSTAAAAATQQLFSYKMASSFQNPATTGTQSTVS
TSAPVGSCMRGGYDYRLGGGGGGGGGPAAPPSVQWWYPGGVMEAPQNNLHQQQQLQQSQQ
QQQQHLSSITTQASTPPIMSPHQIQQLPQQQNNLQNNVQGLQRAKMPRGKAADAKPRGRM
TAYAFFVQTCRQEHKKKHPEENIVFQEFSKKCALRWKTMSDKEKKRFHEMAEKDKKRYDA
EMQNYTPPKGESKTGRGKKRKHIKDPNAPKRSLSAFFWFCNDERGKVKSLNPEYGVGDIA
KELGKKWSDAEPETKSKYEAMAEKDKARYEREMTAYKKKLKTGGPGVGAPAIAVKHDSEE
DAEEEDGEEDDE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacaccaccgcgttggcggtggatggggcacagcgtccccgggaacccgtgag
gatggatccggtggacccgtgtggtggccagccggtctcaacgcggtatcacctgaacaa
caacagcaaaatctgcagcaacatcatcaacatttgatcaatcaacagcaacaacagcag
cagcagcaacaacagcagcagcaacagcaacagcaacaacaacagcaacaattgtcccag
catcaccaggatatcgtcagaagtacagcggccgctgcggcaactcagcaacttttctca
tacaagatggcctccagcttccaaaatccagcaactaccggcactcagtcgaccgtttcg
acgtccgcgccggtgggatcgtgtatgcgggggggttacgattacaggctcgggggtgga
ggtggaggtggcggtggacccgcggcaccccccagtgttcagtggtggtacccaggaggc
gttatggaggcaccgcaaaataatcttcaccaacaacagcaacttcagcagagccaacaa
cagcagcaacagcacctttcgtctattactacgcaagcttccacgccccccattatgtcc
ccgcatcagatacagcagctaccgcaacagcaaaataatctgcaaaataacgtgcagggc
ttacagcgagcaaaaatgccgagaggaaaggcagcggatgctaagccgagggggcgaatg
actgcgtacgcgttcttcgtacagacttgccgtcaggagcacaagaagaagcatcccgaa
gagaacattgtattccaggagttttccaaaaaatgtgctctcaggtggaagactatgtca
gacaaggaaaagaaacgctttcacgagatggctgagaaagataagaagaggtacgacgcc
gagatgcagaactacacccctccaaagggtgagagcaaaacaggcagaggaaagaaacgc
aagcacatcaaagatccaaacgcacccaagagatcattgtcggccttcttttggttctgt
aacgacgagcgtggtaaggtcaagtctttgaacccggaatacggagtcggagatatcgct
aaggagctaggaaagaagtggtccgatgcagaaccagaaaccaaatccaaatacgaggct
atggcagagaaggataaagctcgatacgaaagggaaatgactgcatataaaaagaagttg
aagaccggcggacctggcgtcggagcccctgcaatcgccgtgaagcatgacagcgaggag
gatgcggaggaggaagacggtgaagaggatgacgaataa
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