Athalia rosae (coleseed sawfly): 105683569
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Entry
105683569 CDS
T09776
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03030
DNA replication
aroa03410
Base excision repair
aroa03420
Nucleotide excision repair
aroa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105683569
03410 Base excision repair
105683569
03420 Nucleotide excision repair
105683569
03430 Mismatch repair
105683569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aroa03032
]
105683569
03036 Chromosome and associated proteins [BR:
aroa03036
]
105683569
03400 DNA repair and recombination proteins [BR:
aroa03400
]
105683569
DNA replication proteins [BR:
aroa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105683569
DNA Replication Termination Factors
ELG1-RFC complex
105683569
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105683569
DNA repair and recombination proteins [BR:
aroa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105683569
Check point factors
HRAD17(Rad24)-RFC complex
105683569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_lid_RFC1
AAA_14
AAA_16
nSTAND_NTPase5
Mg_chelatase
Rad17
AAA_11
AAA_19
RuvB_N
AAA_assoc_2
nSTAND3
Viral_helicase1
AAA_24
AAA_18
MeaB
ABC_tran
AAA_5
DNAX_ATPase_lid
MipZ
AAA_23
RNA_helicase
NTPase_1
IstB_IS21
AAA_28
AAA_29
AAA_25
AAA_3
SRP54
Motif
Other DBs
NCBI-GeneID:
105683569
NCBI-ProteinID:
XP_012251675
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All DBs
Position
3:15615382..15617037
Genome browser
AA seq
350 aa
AA seq
DB search
MAGEDETDEPMEIEAEPSTSGVVQQSKSSRKNSHLPWVEKYRPQVFSDIVGNEDTVARLA
IFAKNGNAPNIIIAGPPGVGKTTTILCLARVLLGPSFKDAVLELNASNDRGIEVVRNKIK
MFAQQKVTLPKSRHKIIILDEADSMTDGAQQALRRTMEIYSSTTRFALACNNSEKIIEPI
QSRCAMLRYGKLSDAQILAKVIEVCQKENVSYTDDGLEAIIFTAQGDMRQALNNLQSTHN
GFGHVNGENVFKVCDEPHPLLVKDMLEQCSRGNIEKSFEVMSHLWKMGYSAEDIIGNVFR
VCKNLEINERKKLEFIKEIGLTHLGIVNGLNSLLQMQSLLARMCRISRQQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgaagacgagactgatgaaccgatggaaattgaagctgaaccatcgactagc
ggagttgttcaacaaagtaaatcaagtcggaaaaattcgcatttgccatgggttgaaaaa
taccggccccaagtattttctgatatagtgggtaatgaggataccgttgcacgacttgct
atatttgctaaaaatggaaacgcaccaaatataataattgctgggccacccggggtggga
aagactacgacgatcctttgtttagcccgagttcttcttggcccatcgttcaaagatgct
gtactcgagctcaatgcatcgaatgacagaggaatcgaagttgtcagaaacaagatcaaa
atgtttgcacagcaaaaggttacccttccgaaatcaaggcacaaaataatcattctcgat
gaagctgatagtatgacggatggtgctcaacaagcccttcgtagaacaatggaaatatac
agtagcacaaccagatttgcattagcctgcaataacagcgaaaaaatcattgaacccata
caatcaagatgtgcaatgctgaggtatgggaagttatctgatgctcaaatcctggctaaa
gtaatcgaagtctgccaaaaagaaaatgtctcatatacagatgatggattagaagcaata
atattcacagctcaaggtgatatgcgacaagcactaaacaatcttcagtctactcacaat
ggattcggtcacgtgaacggagaaaacgttttcaaagtgtgtgatgaaccacatcctctt
cttgttaaagatatgctggaacaatgctcgcgaggaaacatcgagaaatcctttgaagta
atgtcgcacttatggaagatgggatattcagccgaggatataattggcaacgtattcaga
gtttgtaaaaaccttgaaatcaacgaaagaaagaagctggaattcatcaaggaaattggc
ttgacgcatttaggcatcgtaaatgggttgaacagtttactccagatgcagagtctcttg
gcacggatgtgtcgaatatctcgtcaacaatga
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