KEGG   Athalia rosae (coleseed sawfly): 105683569
Entry
105683569         CDS       T09776                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
aroa  Athalia rosae (coleseed sawfly)
Pathway
aroa03030  DNA replication
aroa03410  Base excision repair
aroa03420  Nucleotide excision repair
aroa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aroa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105683569
   03410 Base excision repair
    105683569
   03420 Nucleotide excision repair
    105683569
   03430 Mismatch repair
    105683569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aroa03032]
    105683569
   03036 Chromosome and associated proteins [BR:aroa03036]
    105683569
   03400 DNA repair and recombination proteins [BR:aroa03400]
    105683569
DNA replication proteins [BR:aroa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105683569
  DNA Replication Termination Factors
   ELG1-RFC complex
    105683569
Chromosome and associated proteins [BR:aroa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105683569
DNA repair and recombination proteins [BR:aroa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105683569
  Check point factors
   HRAD17(Rad24)-RFC complex
    105683569
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_lid_RFC1 AAA_14 AAA_16 nSTAND_NTPase5 Mg_chelatase Rad17 AAA_11 AAA_19 RuvB_N AAA_assoc_2 nSTAND3 Viral_helicase1 AAA_24 AAA_18 MeaB ABC_tran AAA_5 DNAX_ATPase_lid MipZ AAA_23 RNA_helicase NTPase_1 IstB_IS21 AAA_28 AAA_29 AAA_25 AAA_3 SRP54
Other DBs
NCBI-GeneID: 105683569
NCBI-ProteinID: XP_012251675
LinkDB
Position
3:15615382..15617037
AA seq 350 aa
MAGEDETDEPMEIEAEPSTSGVVQQSKSSRKNSHLPWVEKYRPQVFSDIVGNEDTVARLA
IFAKNGNAPNIIIAGPPGVGKTTTILCLARVLLGPSFKDAVLELNASNDRGIEVVRNKIK
MFAQQKVTLPKSRHKIIILDEADSMTDGAQQALRRTMEIYSSTTRFALACNNSEKIIEPI
QSRCAMLRYGKLSDAQILAKVIEVCQKENVSYTDDGLEAIIFTAQGDMRQALNNLQSTHN
GFGHVNGENVFKVCDEPHPLLVKDMLEQCSRGNIEKSFEVMSHLWKMGYSAEDIIGNVFR
VCKNLEINERKKLEFIKEIGLTHLGIVNGLNSLLQMQSLLARMCRISRQQ
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggctggtgaagacgagactgatgaaccgatggaaattgaagctgaaccatcgactagc
ggagttgttcaacaaagtaaatcaagtcggaaaaattcgcatttgccatgggttgaaaaa
taccggccccaagtattttctgatatagtgggtaatgaggataccgttgcacgacttgct
atatttgctaaaaatggaaacgcaccaaatataataattgctgggccacccggggtggga
aagactacgacgatcctttgtttagcccgagttcttcttggcccatcgttcaaagatgct
gtactcgagctcaatgcatcgaatgacagaggaatcgaagttgtcagaaacaagatcaaa
atgtttgcacagcaaaaggttacccttccgaaatcaaggcacaaaataatcattctcgat
gaagctgatagtatgacggatggtgctcaacaagcccttcgtagaacaatggaaatatac
agtagcacaaccagatttgcattagcctgcaataacagcgaaaaaatcattgaacccata
caatcaagatgtgcaatgctgaggtatgggaagttatctgatgctcaaatcctggctaaa
gtaatcgaagtctgccaaaaagaaaatgtctcatatacagatgatggattagaagcaata
atattcacagctcaaggtgatatgcgacaagcactaaacaatcttcagtctactcacaat
ggattcggtcacgtgaacggagaaaacgttttcaaagtgtgtgatgaaccacatcctctt
cttgttaaagatatgctggaacaatgctcgcgaggaaacatcgagaaatcctttgaagta
atgtcgcacttatggaagatgggatattcagccgaggatataattggcaacgtattcaga
gtttgtaaaaaccttgaaatcaacgaaagaaagaagctggaattcatcaaggaaattggc
ttgacgcatttaggcatcgtaaatgggttgaacagtttactccagatgcagagtctcttg
gcacggatgtgtcgaatatctcgtcaacaatga

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