Athalia rosae (coleseed sawfly): 105683702
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Entry
105683702 CDS
T09776
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105683702
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105683702
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
105683702
NCBI-ProteinID:
XP_012251900
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Position
1
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AA seq
928 aa
AA seq
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MRPQRFEIPFNTDNLLNADRKVVVVSVFGKSHFRAKGCKTEMLSSILQTDFLKEPMLNEE
DLCEIEGYHDTRDRVVYLHLRGLLDTHTLVKAYDRFINKCEGKDFLTAWAHMREKYSRAL
LVLFHISHILILTHPTHSFDYSYVHLFRALDMIRQKVSSQVGEILSGISRLPKDWIANLR
PCSPRVLFYFETCPTVFRDSEGGNIKKLEHSLEDQIYHILRKNRIVTNISTNSLFAIPAN
QEFVYVHTGSTESGDILGHMARKLIQSCKVSSGGDTSRSLASIDSVFPASDSESDVHTFK
AFLQQHISLAFARGFDDNVGRHTAPAHFQIPTLSLFFEVANKLMGFFVKGTDKEIFALHG
LLDTDVKFSKSRCSKVLPRALQTYQDGLPQHYTRAYHETKLAHAMTVFEMHARGPLFEEF
SEKLQQECDKHWRAGRQMCEVLSLTGNPCTNPIHKGGSEGAGGGEQCEPVEDDRDLAVME
HSSGVRYVCACNCGRCQGPREDPFSLRQANYDYFQMLAKQCGCAQLENIQFPVFQPSIHN
FRPAQLFPTTKRKDSFSRIELSTPQGQTQACSLGVNTSHDDVPVFGSGQSAPASDPIGDD
HQRLSNKTSLTPGDTLDPHDSHDKVVIQVCDIDLEHTKGPLRCVSPEANDTEASEKFLVR
QPSTTEYLPGMLHTESPVGLLPQFSSWSLVCLGPSSLYSHNLGLQHQAGVCSTSAFLLPW
DVTVRLEHQKDRGSLWPMVGDNPNHGYNRGGKSFQNLNSIRGRKSKGGKEFVVKIFVGVE
YECPRGHRFMASAPDKVLKATGTGIVKDSGNKVTSSTADMPLYFPCPCRQTKPLIAQLMR
IHVVTPKAPVHVTLNPRVQPGPPPCPIFVTGCEEPIKLSQSAYWVLRLPYVYMGEKGPYL
APKEPVPITHGRLLAGMYGISEVLPEKK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcagaggtttgaaattcccttcaacactgacaacttgctgaacgctgacaga
aaagtagtggtggtgtccgtgtttggaaaatctcattttcgtgctaagggatgcaaaaca
gaaatgctcagttcaatactccaaacggactttctcaaggaaccgatgctcaatgaagaa
gacctgtgcgagattgaaggatatcatgacacacgagaccgtgtagtttacctgcatctc
aggggcctgctggatactcacacgctcgtcaaagcatacgatcgattcatcaataagtgc
gagggaaaagattttttgaccgcttgggcccacatgagagagaaatactcccgagccctg
cttgtcttatttcatatttcccacatcctcatactcacgcatccaacgcacagcttcgac
tatagctatgttcacttgtttagagcactggatatgataaggcaaaaagtctcaagtcaa
gtgggagaaattttgagcgggatttcaagacttccaaaggactggatagccaacctcagg
ccctgctctcccagagtgcttttttactttgaaacatgccctacagtgtttcgggactca
gaaggtggtaatatcaaaaagcttgagcattcactggaagatcaaatatatcatatatta
cggaaaaatcgaatagtgaccaatatcagtacgaattcactgtttgcaatcccagctaat
caggaatttgtatatgttcacactggttcaactgagtcaggggatattttgggtcatatg
gccagaaaactaattcagagctgtaaagtgagttccggtggtgatacttctaggagcttg
gccagcatagactctgtatttccagccagtgattcagaatctgacgtacataccttcaag
gctttccttcagcagcacataagtttagcatttgccagaggttttgacgataatgtcggc
cgacacacggcaccagctcactttcagataccaacactgtccttgttttttgaagtagct
aacaagctcatgggttttttcgtgaaggggacagacaaggaaatctttgctctgcatggt
ttactagacactgatgtaaagttcagcaaaagtagatgcagcaaagtgttacctagagca
ttgcaaacctaccaagacggtcttccgcaacattataccagggcatatcacgagactaaa
ctagctcatgcgatgacagtctttgaaatgcacgcccgtggcccattgttcgaagagttt
agtgagaaactgcaacaagaatgcgacaaacactggcgagctggcagacaaatgtgtgag
gtcctttcattgactggaaacccttgcactaatcctatccataaaggtggcagtgaaggt
gccggtggtggggagcagtgcgagccagtagaggatgatagagatttagcagttatggag
cacagcagtggtgtgagatatgtgtgcgcctgcaattgcggcagatgccagggaccaaga
gaagatcctttcagcttgagacaggcaaattacgactactttcaaatgcttgccaaacaa
tgtggatgtgcccagctggagaatatacagtttccggttttccaacccagtatacataac
ttcagaccagcccagctgttccccacaacgaaacggaaagactctttcagtcgtatagaa
ctttcaactcctcagggacagacgcaggcctgcagtttgggagtgaatacatcgcatgat
gacgttccagtgtttggtagtggacagtctgcgcctgctagtgatccgataggtgacgac
catcagaggctgagtaataaaaccagtcttactccaggcgatacgttagacccccatgat
tctcatgataaagttgtgattcaagtatgtgacattgacttggaacataccaaaggacct
cttcgctgtgtttctccagaggctaatgacactgaagcttcagaaaaatttctagtacgc
cagccatccacaacggagtatctgccaggaatgctacatacagaatcccctgttggtctt
ttgccccaattttcaagctggtctcttgtctgcctggggccgagcagtctatattcccac
aatttgggtcttcaacatcaagccggtgtttgttctacgtcagcatttctgctaccatgg
gatgtcactgtcagattggagcaccaaaaagacaggggatccctgtggccaatggttggt
gacaatcccaaccacggctacaaccgtggaggaaaaagcttccagaatttgaattccata
cgtggccggaagtccaagggaggcaaggaattcgttgtaaaaatatttgttggcgttgaa
tacgagtgtccgcgcggtcacagatttatggcatctgctcctgacaaagttctcaaggcc
actggaactggtatcgttaaggacagtgggaacaaagtcacttcaagcaccgccgatatg
cctctttactttccttgcccatgcagacaaacaaagccattgattgctcagctgatgagg
atacacgtagtaacgcccaaagctccagtgcacgtcacgctgaatccacgcgttcaacct
ggtccaccgccatgcccgattttcgtcaccggttgtgaggaacccatcaaattatcacag
agtgcctactgggttctccgactcccgtatgtttacatgggagaaaaaggaccatactta
gcacctaaagaaccagtaccaataactcatggtagactactagctggtatgtacggcata
agtgaagttttaccagaaaaaaaatga
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