Athalia rosae (coleseed sawfly): 105683890
Help
Entry
105683890 CDS
T09776
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03440
Homologous recombination
aroa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105683890
03460 Fanconi anemia pathway
105683890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aroa03400
]
105683890
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105683890
DNA repair and recombination proteins [BR:
aroa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105683890
FA (Fanconi anemia) pathway
Downstream FA components
105683890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
105683890
NCBI-ProteinID:
XP_012252285
LinkDB
All DBs
Position
2:8630507..8679549
Genome browser
AA seq
1044 aa
AA seq
DB search
MLFILTAILSIVCAYAVLFYRSKPPSNRLSMSHKSQMICISSDEDDDTFTSKRRSEPMDL
MTDEGSPKKIPEDRSEEEDEETGIFEIFQKKKVKTGTPSSKPKPRVRKERKPTRGRSSGN
FNRGKARGGSTPGGTKGPQSSANKNDWNSGADGKQTDQVDLTNDEVAYDSNPPASKLTRN
TGAWIRKHITVAFERNEKDEKSKVALEEVQHEVLQISGITVKFPVQPYASQIAVMSKMIQ
GCKKKENCLLESPTGSGKTLALLCGVLAWQDHVKEEVKKQIEELRTKNEEFGASEGEPCL
EKKRESDSRTSGNAIFTPNVEQGAGDTSALKSCRLARDDDVESSNEADLQPRKRFCPSTS
PGSAIQKEKLDADSILEDDGDTVAPVLKLMQKVPTIYYGSRTHKQIEQVIRELKKTAYAH
KPMTILSSREFTCIQESKENKTELCNRLLDPQKASGCRYYNESNRQRISSNYMLNNLGIN
GPWDIEDLVEIGKEQSACPYFAAKTLMSEADIVFCPYNYLVDPSIRESMQLQLSGQVVIL
DEAHNIEELSREVGSITFRADKISEAAVECKILRASRKDDCLTYEEIEAYLLSLLDFLKV
NILNTVDKFNDTASSAFWTGRELKELFDIHGLGKGVCNSFKAAAGAAIKDFTSAKESITK
QQSGVILMPTITQMTKNLLEDLLFALKVLTTESLADDYRSCIIESNVQDSRPLADNTWHS
RDSTIRMRSLQMLCMNPAVIFAPLANMARSIILASGTLSPINSFQSELGTIFTHKLDANH
VVPKENVYIRGISCGPTGAQLKANYTNVNSWTFQDELGNLILQVSRVIPHGVLCFFSSYS
MMEKQITRWKQTSCWTRLEEIKYVLQEPRGTSKLAPIMKKYREIIQATSDGPQDGVTGAL
LFAVFRGKIAEGIDFSDDEARCVMTIGIPYSVRKDPSVDMKFTYNDLKQSKGLLKGGEWY
TVQAFRALNQALGRCLRHRNDWGAVLLVDQRFLEPTNYNYLPKWVKTMWRDSTRYDLSQE
LRQFVAKQLERTKPKTLDTDSSDL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgttatttattttaacagcgatattatcaatcgtctgtgcctacgcagtgcttttttac
agaagtaaacctccttcgaaccgtttaagcatgtctcacaaatcacaaatgatttgcatc
agcagcgatgaagatgacgacacttttacgagtaaacggagatcggagcctatggatttg
atgaccgacgaaggttctccgaagaaaatccccgaagatcgctccgaagaagaagatgaa
gagaccgggatcttcgaaatcttccaaaagaaaaaggtgaaaaccggaaccccctcgtcg
aaacctaaacctcgtgtccgaaaagagagaaagccgacacgcggtagaagctcaggtaat
ttcaaccgggggaaagcacggggtggatcgactcccggaggaacaaaaggaccgcagagc
tcggcgaataaaaatgattggaattccggtgccgatggaaaacagaccgatcaagttgat
ttgactaacgatgaagttgcctacgattcaaatccgcccgcttctaaacttacgaggaat
acgggtgcgtggatcagaaagcacatcaccgttgcgttcgaacgaaacgaaaaagacgag
aaaagcaaagtagccttggaagaagttcaacacgaagtgctgcaaatctctggaatcacc
gtaaagtttcccgtacaaccgtacgcctcgcagatcgccgttatgagcaagatgatccag
ggatgcaaaaaaaaggaaaactgtctgctggagagtcccacaggaagtgggaaaactctg
gctctgttgtgcggtgtattggcctggcaggaccacgtcaaagaggaagtaaaaaagcaa
atcgaagagcttcggaccaagaacgaagaatttggggcgtcagagggagaaccgtgcctg
gagaagaagcgagaatcggattcaagaacatcgggtaacgctattttcactccgaatgta
gaacagggcgcgggagacacctccgcgttaaaaagttgcagactcgctcgggacgatgat
gtcgaatcgtcaaacgaagcggatcttcagccacgcaaaagattctgcccatcaacatcg
cccggttcagctattcaaaaggagaaattggacgccgacagcattctcgaagatgacgga
gataccgtcgcacctgtattgaaattaatgcaaaaagtaccgacgatatactacggatca
cgcacgcacaaacagattgaacaggtgattagggagttgaagaaaaccgcttacgcacac
aaacctatgacaattttaagcagtagagaattcacatgcatacaagagtcgaaagaaaat
aagactgaactttgcaaccgtcttcttgacccacaaaaggcctctggctgtagatactac
aacgaaagcaacagacaaaggatatcctcgaactatatgttgaataatttgggaattaac
ggaccatgggatatcgaagacttggtagaaattggcaaagagcaatcagcgtgtccatat
tttgcagctaagaccttgatgtcggaggcggatattgttttttgtccttacaactatttg
gttgatccaagtattcgcgaaagcatgcaactacagttgtccggccaagtagttatcctg
gatgaggctcacaatatcgaagaattgagcagagaggtgggaagtattacttttcgtgca
gataaaatctccgaagctgccgtggagtgcaaaatactccgtgcgtcacgtaaagatgat
tgtctgacctatgaagagattgaagcatatcttttgagtttactcgacttcttaaaagtc
aacattttgaacacggtggataaattcaacgatacagcgagcagtgctttctggactgga
cgcgagctcaaagagttgttcgatatacacggtttgggcaaaggcgtatgcaattctttt
aaagcagctgcgggtgcagcaataaaagactttaccagcgcaaaagaatcgattacgaaa
caacaatctggtgttatattgatgccgacgataacgcagatgacgaaaaacttgttggaa
gacctcttgtttgcgcttaaagtgttgactaccgaatctttggctgacgactacaggtcc
tgcatcatcgaatcaaatgtccaagattcgagaccattggctgataatacttggcactcg
cgagattctactatacgcatgcgttctctccaaatgctgtgcatgaatccagcggtaatt
tttgctcctctggcgaatatggcaaggtcgataatccttgcgtctggaacactgtcgccg
ataaattctttccaaagcgaactgggaactatctttacgcacaaattagatgccaaccac
gttgtacccaaggaaaacgtgtacattcgaggaatttcatgcggtcccaccggagcgcag
ctcaaagcaaactatacgaacgtcaactcctggactttccaagatgaattgggcaacctc
atcctacaagttagtagggtgattccacacggagtcttgtgctttttctcgtcatatagc
atgatggagaagcaaatcactagatggaagcaaacttcatgctggacgagattggaggaa
atcaaatatgtcttacaggaaccaaggggtactagtaagcttgcaccaattatgaaaaag
taccgggagatcattcaagcaacttcagacggcccacaagacggggttactggagctcta
ctcttcgcagttttcagaggaaaaattgcagaaggaattgatttcagtgatgatgaagca
cgatgtgttatgacgattggaataccctattctgtccgaaaagatccatcagtagatatg
aagtttacatacaatgacctgaaacaatcaaaaggcttgctaaaaggtggcgaatggtat
acagttcaagcattcagagctctgaatcaggcccttggacgttgcttaagacatcgtaat
gattggggagccgtgcttctggtcgatcaacgatttcttgaacccactaattataactat
ctaccaaaatgggtcaagacaatgtggcgggattctacgcgatatgacctatctcaagaa
cttcgacaatttgtagccaaacagcttgaacgaacaaaaccaaaaaccttggataccgat
agctctgatctataa
DBGET
integrated database retrieval system
