Athalia rosae (coleseed sawfly): 105683916
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Entry
105683916 CDS
T09776
Name
(RefSeq) polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03015
mRNA surveillance pathway
aroa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105683916
09123 Folding, sorting and degradation
03018 RNA degradation
105683916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105683916
03041 Spliceosome [BR:
aroa03041
]
105683916
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105683916
mRNA cycle factors
Stress granule specific factors
105683916
Spliceosome [BR:
aroa03041
]
Complex C
Other components
Complex C specific factors
105683916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RBD_DEAH11
RRM_occluded
RRM_10
Nup35_RRM_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
105683916
NCBI-ProteinID:
XP_012252328
LinkDB
All DBs
Position
8:complement(323246..326456)
Genome browser
AA seq
631 aa
AA seq
DB search
MNPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKHIDNKAMYDTFS
AFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFIPRKER
EKELGEKAKLFTNVYVKNFGEEMTDEKLRDMFEKYGPITSHKVMNKDDGKPRGFGFVAFE
DPDAAEQAVLDLNGKEIIDGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYV
KNLDDTIDDERLRKEFTPFGTITSAKVMMEEGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GTKPLYVALAQRKEDRKAHLASQYMQRMANMRMQQIGQIYQPGAAGSYFVPTIPQPQRFY
GPAQMAQIRATPRWPAQPNQVRPNSQTGGSGFATMPGQFRAAARAPAAQAGAMRNTLSAR
PITGQQAVGGANMPGRTMAGGPAVGVSPQGRTSNYKYTANMRNPPPAMAIPAPAPVQQAV
HIQGQEPLTATMLAAAQPQEQKQMLGERLFPLIQRMYSDLAGKITGMLLEIDNSELLHML
EHNESLKAKVEEAVAVLQAHQAKQAVAPKKE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaggagcaccaaattatccgatggcttctttatacgttggtgatcttcattcg
gacataaccgaagctatgctttttgaaaaattttcatccgcgggaccagttttatccata
cgggtttgtagggatatgattactcgtcgttctctcggctatgcttatgtcaattttcaa
caaccagctgacgccgagcgtgcgttagatacaatgaatttcgacatgataaaaggacgt
ccaataaggataatgtggtcacagcgagatccttctctgagaaaatctggtgtcggaaat
gtattcatcaagaatctggataaacatattgacaacaaagcaatgtacgacacattctcg
gcgtttggtaatattctcagttgtaaagtagcacaagatgaaacaggagcttccaaagga
tatgggttcgtacattttgaaaccgaggaggccgccaataagtccatcgacaaagtaaac
ggcatgctgcttaatggaaaaaaagtttacgttggaaaatttatcccaaggaaagaacgc
gaaaaggaactaggtgaaaaggctaagctgtttactaacgtgtacgtcaagaatttcggc
gaagaaatgaccgatgaaaaactccgagatatgttcgaaaaatatggtccaattacgagt
cataaagtcatgaataaggacgatggtaaacctcgaggttttggttttgtggcgtttgaa
gatcccgatgcagctgagcaagcagtcttagacctcaacggtaaagaaataattgacgga
aaatgcatgtatgtcggaagagcgcagaagaaggccgaacgtcagcaagaattgaagcgt
aaatttgagcaacttaaaatagagcggctgaatcgttaccagggtgtaaatctctacgtt
aaaaatctagatgatacaatagacgacgaacgtctgcgcaaagaattcacaccctttggg
acaataacctctgccaaagtaatgatggaggaaggacgtagcaagggttttggatttgtc
tgtttctcgtctccggaggaggcgacgaaggcggttacagaaatgaacggacgtattgtc
ggtacaaaaccactctacgttgctcttgctcaacgtaaagaagatcgcaaggctcatctc
gcttcacaatacatgcagagaatggccaacatgcgcatgcaacaaataggccagatttac
cagccgggtgcggcaggcagctattttgttcctaccattccacagccacagagattttat
ggacctgctcaaatggcccagattcgtgctacaccaaggtggccggcgcaacctaatcaa
gtccgacctaactctcaaacagggggctccggatttgcaactatgccaggccagttccgc
gctgcggctagagctccagcagcacaagccggtgctatgcgtaacactctctccgccagg
cccattactggtcagcaagcagtcggaggtgctaatatgcctggtagaacaatggccgga
ggtccagcagtcggtgtatcacctcaaggtcgtacatcgaactacaaatatacagcgaac
atgcgtaatcctcctccagcaatggctattcccgctccagctccggttcaacaagcggtc
cacattcaaggtcaagaaccactgacggccacaatgcttgcagcagctcaacctcaagaa
caaaaacaaatgttgggagaacgtttattccccttgattcaaagaatgtattcggatctt
gctggcaagatcactggaatgttgctcgaaatcgacaactctgaattacttcacatgctc
gaacacaacgagtctctaaaagcaaaggttgaagaagctgtcgcagtacttcaagctcat
caggctaaacaggctgttgctcccaaaaaagagtag
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