Athalia rosae (coleseed sawfly): 105683953
Help
Entry
105683953 CDS
T09776
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105683953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
PAH_ZNF598
RIX1
Motif
Other DBs
NCBI-GeneID:
105683953
NCBI-ProteinID:
XP_048511148
LinkDB
All DBs
Position
5:complement(15799999..15807705)
Genome browser
AA seq
1781 aa
AA seq
DB search
MIGLQCSVFVTSVLLVTVLTDAVGGQHVRERSRIPHRGLPQKHLLPCEQGSCYPATGDLL
IGRESKLTASSTCGMRGPERFCIVSHLKERKKCFYCNGDIPKQQHRVENIVHKYVPGTNQ
ESWWQSENGVENVTLRLDLEAEFHFTHIIIKFHTFRPAAMLIERSYDFGKTWQVYKYFAH
NCAQSFPGVPTTPPRKLTDVVCDSRYSTVDPSTDGEIIFRVLSPNVQIDNPYSKEVQNLL
KMTNLRINFTRLHTLGDDLLDNRAEIREKYYYAIKDMVVRGSCSCYGHASRCLPLPGIPQ
RQDMVHGRCECTHNTKGLNCEMCEDFYSDLPWKPAVGKQTNACKKCNCNGHSNTCHFDPA
LYERSGRISGGVCDDCRHNTRGQNCEQCMEFFYHDLARDISDPEACQPCDCDLTGSLDDG
ICDSLSDTLSGEESGRCHCKLNVEGRRCDRCKTGFWNFTSENPEGCQACTCNTLGTIGNL
GCDVDDGRCTCKSWVTGRDCDQCFPEFWGLSEDTDGCKPCGCDLGGAYDNSCDVVTGQCR
CRPHVDGRACDRPEQNHYTVSLDFLVYEGEGGLSNRSQVVVREAYRDGRPPTWTGEGFMR
AFEGSSLEFVIDDVRKSMEYDVIVRYEPELPGLLEEADVSIRREEEVDPEGPCADWEPGY
DELTVRIPANSRSAVAVPSVCLEEGKKYVVVLQFKKSFDRTSGPAASILVDSIVLMPRLA
DIPFFKGSKPAEMRREEFERHRCDEVYHNVVSTGGSNSVDICAKYRKSIGYYVFDGAYSC
ECNPTGSHSLLCQQYGGSCPCKANVVGRRCDQCAPGTYGFGPGGCVPCGCDSVGSEDNFC
DAKTGRCKCRPNTYGRTCGECEPGFWNFPRCQRCECHGHAETCDSVTGACQGCRDFTTGH
HCDRCAETFYGDPRIGVDIPCRSCPCPGTIDSGHSYAESCSLDPVTQDVVCECHAGYAGS
RCEICADNYFGNPDVQTGSCVPCDCSNNTDPRRSGNCNPHTGRCLQCLYNTDGPNCQICK
AGFYGDAFEQDCRECNCDVLGTDQRAGPCVHRTGQCPCLPNVVGQRCDACAENHWRIASG
EGCDPCDCDGIGSVSDRCNEYDGTCECKPGFGGRRCNQCQANYWGNPNLECRPCECDVTG
SSTEQCDRETGACVCHDGIGGDKCDHCDRGYVGFAPNCSPCGECFENWDEILVGLANQTR
DLVDSASRIQDVGTTGAYGQEFEDMEEALNQVEGLVGNTSVKNEDLQGLLDIARELNDTL
LFAVPALDELDEFQEAIGRRISLGDVALQNMRNRTSSLIQAAFELQGNATALQEADLYGA
LNVTHQMAEQSRLAEALAESSTSVLADADRYHKNTENFLTKSSTSFIDMFNENEDSLEKL
DNKLTQFNELIPGMNLDICGKRVEECDELCGGAGCGFCGGHSCDAGAVTDSERALDLAKQ
RSLGLKKHKDEGEQLLRRMLRTKDNARLARSDAESAFQVAFNVYNRSNKVSKDISNLEEK
ISGVLNEDQPTPSMVRELALSVLKKNIILNPEEIRDLANSIKSIVGSLTDSDQILDDTEE
DLQTAEVLLEDAESAKNLAEAQSVLVGNVVVLLSEAEVAAGSVESAIENIELDISASRED
LSEIFSAVEATGEIADNSTAGIAELESRLTELQTQVVKNDFILTQEIESEVKSTAEEAEA
TKSKSEKLAADFVGASDSLGSNAEKNSGKILRAKMLLQRASELAADTATKFKDINGMEGA
YAENEKTLEDLVAEVESLTQQMEQHFIEIQQKSQTYNRCLT
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgatcggacttcagtgctcggtcttcgttacttcggttttgttggtgacagtgctgaca
gatgcggtgggaggccaacatgtccgcgagagaagtcggattccccacagaggattaccg
cagaagcaccttcttccctgcgagcagggatcgtgctatcccgcgaccggagatttgctg
atcggaagggaaagcaaactgaccgcttcttctacttgtggcatgagaggaccggagaga
ttttgcatcgtgtctcatttgaaggagagaaaaaaatgtttctactgcaacggtgacata
ccgaaacagcagcatcgggtggagaacatcgttcacaaatacgtacccggaaccaatcaa
gagtcctggtggcagtcggaaaacggtgtggaaaacgtcacgttgcgattggatctggag
gcggaattccacttcacgcatatcatcattaaatttcacacctttcgtccggcggcaatg
ctgatagaacgttcgtacgattttggcaaaacctggcaagtctacaaatacttcgctcac
aattgcgcccagtcgtttcccggtgtcccgaccactccgccgcgaaaattgaccgacgta
gtctgcgactcgagatactcgacggtggacccgtcgaccgatggcgaaatcatcttcagg
gttttgtcgccgaacgttcagatcgacaatccgtactccaaggaggtccagaatctcctg
aagatgaccaatctcaggataaacttcaccagacttcacacactgggcgacgatttgctg
gacaaccgggcggagatcagagaaaagtattactacgccatcaaggacatggtggtcaga
ggctcctgttcctgctacggacacgcgtccaggtgtctcccgcttcccggaatacctcag
agacaggacatggtccacggacgttgcgagtgtacccacaacaccaagggtctgaactgc
gagatgtgcgaagatttttacagcgatctaccctggaaacctgctgttgggaaacagacg
aacgcttgcaagaaatgcaactgcaacggccactcgaacacctgccatttcgatccggcc
ctctacgaaagatcgggaagaatttcgggcggtgtctgcgacgactgtcgtcacaacacc
aggggacagaattgcgaacagtgcatggagttcttctatcacgatctcgcgagggacatc
agcgaccccgaagcctgtcaaccctgcgactgcgacttgaccggttcactggacgacgga
atctgcgactctctcagcgacacgctgagcggcgaagaatccggtcgttgtcattgcaaa
ttgaacgtggaaggccgacgatgcgatcgctgcaagactggcttctggaatttcacatcc
gaaaacccggagggttgccaagcatgcacttgcaacactctgggaaccatcggaaacctc
ggttgcgacgtggacgacggaaggtgcacctgcaagtcgtgggtgacggggcgcgattgc
gatcagtgtttcccggagttttggggtctctccgaggacaccgacggctgcaaaccgtgc
ggctgtgacctcggtggcgcctacgacaactcctgcgacgtcgtcactgggcaatgcaga
tgcagaccacacgtggacggaagggcttgcgatcggcccgagcaaaatcactacacggtt
tcgctcgactttttggtctacgagggagaagggggactttcgaaccgaagccaggtcgtc
gttcgtgaagcctaccgcgacggcagacctccgacttggaccggagagggcttcatgagg
gccttcgagggctcgagtctcgagttcgtaatcgacgacgtcagaaaatcgatggagtac
gacgtgatagtgcgctacgagcccgagctccccggtttgctggaggaggccgacgtttcc
atcagacgagaggaggaagtcgatcccgagggaccctgcgccgattgggaacccggctac
gacgagctgaccgttcggattccggcgaattctcggagcgccgttgccgttccgtcggtc
tgcttggaagaggggaagaagtacgtcgtcgtacttcagttcaaaaagtcgttcgaccga
acgagcggtccggccgcttcgatactggtcgactccatagttctgatgcccaggctggcg
gatatcccctttttcaaaggatcgaaaccagcggaaatgcggagagaggaattcgagcga
catcgctgcgacgaggtataccacaacgttgtgtcgaccggcggatcgaacagcgtcgac
atctgcgcgaaatatcgaaagagcatcggctactacgttttcgacggggcgtattcttgc
gaatgcaatccgaccggatcccacagtttactctgtcagcaatacggcggttcctgtcct
tgcaaagcgaacgtcgttgggcgtcgttgcgatcagtgcgctcccggtacgtacggtttc
ggtcccggtggttgcgtgccgtgcggatgcgacagcgtcggttcggaggataatttttgc
gacgcgaaaaccggaaggtgcaaatgccgtccgaacacctacggccgcacgtgcggcgag
tgcgaacccggcttctggaacttccctcgttgccagaggtgcgagtgtcacgggcacgcg
gaaacctgcgactccgtgacgggcgcttgtcaaggttgcagggatttcacgaccggacat
cactgcgaccgttgcgccgagacgttctacggtgatccgagaatcggcgtcgacataccg
tgcaggtcttgcccctgcccgggaacgatagactccggtcattcgtacgccgagagttgt
tccctggatccggtcactcaggacgtggtgtgcgaatgtcacgcgggttacgcgggttcc
agatgcgaaatttgcgccgacaattatttcggcaatcccgacgtacagacgggcagttgc
gttccctgcgactgcagcaacaacacggatccgaggaggtcgggaaattgcaatcctcac
acgggacggtgtctccagtgtctttacaacacggacggtccgaattgtcagatttgcaaa
gccggattctacggcgacgctttcgaacaggactgcagggagtgcaactgcgacgtactc
ggcaccgatcaacgagccggtccgtgcgttcacagaactggacagtgcccctgtcttccg
aacgttgtcggtcaacgttgcgacgcttgcgccgaaaatcattggaggatagcgagcggc
gagggatgcgatccttgcgactgcgacggaatcggaagcgtttccgacaggtgcaacgag
tacgacggcacctgcgaatgcaaaccgggcttcggcggcaggcgatgcaaccagtgccaa
gcgaactactggggcaatcctaatctggaatgtcgaccgtgcgagtgcgacgtcacggga
tcttcgaccgagcagtgcgacagggaaacgggggcctgcgtttgccacgacggaatcggt
ggcgacaaatgcgaccactgcgatcgcggctacgtcggtttcgctccgaattgcagcccc
tgcggagagtgcttcgaaaattgggacgagattttggtgggattggccaaccaaacgcga
gatctggtggactcggcatcgaggatccaggacgtcggcaccaccggcgcttacggtcag
gagttcgaggatatggaggaggctttgaatcaggtcgaaggactcgtgggcaacaccagt
gtgaaaaacgaagatctccaaggtctgctggacatcgctcgcgaactcaacgatactctg
ttattcgcggtgccggctttggacgaactcgacgaatttcaggaggccatcggtcgacga
atcagtctcggagacgtcgctcttcagaacatgagaaacaggacgtcgagtttgattcag
gccgccttcgaactacagggcaacgctacagctctgcaagaggctgacctttacggcgct
ctcaacgtgacccatcaaatggccgaacagtccagactggccgaagctctggccgaaagt
tcgacgagcgttttggccgacgccgacagatatcacaagaatacggagaattttttaacg
aagtcttcgacatcgttcatcgacatgttcaacgagaacgaagattccctggaaaaattg
gacaacaaactgacgcagttcaacgaacttattcccggtatgaatctcgacatatgcggt
aaacgagtcgaggaatgcgacgaactatgcgggggtgccggatgtggtttttgcggaggt
cattcgtgcgacgcgggtgccgttacggattccgaacgtgctctggacctcgcaaagcaa
agatccctgggtctgaagaagcacaaggacgagggtgagcagcttttgagaaggatgctc
cgaacgaaggacaacgccagactggcgaggtccgacgcggaaagcgcgttccaggttgcg
ttcaacgtttacaacaggtcgaacaaagtttccaaggacatttcgaacttggaagaaaaa
attagcggcgttctgaacgaggaccagccgactccgtcgatggtcagggagctggccctg
agcgtgctgaagaagaacataatcctgaatcccgaggagatcagggatctggcgaacagc
ataaaaagcatagtcggttctctcacggactcggatcagattctggatgacacggaggag
gatctccagacggcggaagtccttctggaggacgctgagagtgcgaagaacttggccgaa
gctcagagcgtgctggtgggaaacgtcgtggtactattatcagaggcggaagtagcagcg
gggagcgtcgagtccgctatagaaaatatcgagctggacatatcggcgtcccgagaagat
ctgagcgaaatattcagcgcggtagaagccacgggcgaaatcgccgacaacagcacggct
ggaatagctgaattggagagtcgattgaccgaactgcagactcaggtggtgaagaacgac
ttcatattgactcaagaaatcgaatcggaagtaaaaagcaccgcggaagaagcggaggcc
acgaaatcgaagagtgagaagctggccgctgatttcgtcggggcgagcgattctctgggt
agcaacgctgagaagaacagcggcaaaattttgagggctaaaatgctccttcagcgcgca
tccgaactcgccgccgataccgcgacaaagtttaaggacatcaacggcatggaaggggct
tacgcggagaacgaaaaaacattggaagatcttgtggcggaagttgaatcgctgacgcag
caaatggaacaacatttcatcgagatacaacaaaaatctcaaacttacaatcgctgcttg
acttga
DBGET
integrated database retrieval system
