Athalia rosae (coleseed sawfly): 105684202
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Entry
105684202 CDS
T09776
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105684202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105684202
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105684202
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105684202
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
105684202
NCBI-ProteinID:
XP_012252808
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All DBs
Position
2:8960414..8962277
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AA seq
298 aa
AA seq
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MNTEDTIRVRLAVHRTNTNVSDGDRAMPRFYTPGEEVCSQVDFMRGHGTYMDENDTLRAS
VAGVLEKVNKLISVKPIKARYQGEIGDVVVGRITELQQKRWKVDTNSKLDSALLLSSVNL
PGGELRRRSAEDEQTMRRYLQEGDLICAEVQNVFMDGSLSLHTRVLKYGKLSQGILLKVQ
PSLIKRRKTHFHKLSNGASLILGNNGYVWIGASVQDSDRSEGGFVQDLSRIPQQDRETCA
RLRNCILALAQSNILLTDTSVTYACEESTKYSVSELLQPEAALDVALLTQQRIGERMD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaagatacgattcgcgtacggctcgcagttcatcgtacaaatacaaatgtc
agtgatggagatcgtgcaatgccaagattttatacacccggcgaagaggtgtgtagtcaa
gtagacttcatgagaggtcatggaacatacatggacgagaatgatactttacgtgcatct
gttgctggtgtactagagaaggttaacaaattaatatctgtgaagccaataaaagccaga
taccagggtgagatcggggacgttgttgttggtcgaataactgagctccagcaaaagcgc
tggaaggtggatactaattcaaaattggattctgcactactattatccagtgtaaatctt
cccggtggagagttgagacgaagatcagctgaggatgaacaaacaatgcgtcgttacttg
caagaaggtgacctaatttgtgcagaagtacaaaatgtattcatggatggttcgctgtca
ttacacaccagagtattaaagtatggaaaattgtcccaaggcatcctcttgaaggtacag
ccctcactaataaaacgtagaaagactcattttcataaattatccaatggtgcaagttta
atacttggaaacaatggttacgtatggatcggcgcaagtgtacaagactctgatcgttca
gaaggtggatttgtacaggatttgtctcgcataccacaacaagatcgtgaaacttgcgca
cgtttgcgaaattgtattctagctttagctcagtcaaacattttactgacagatacatct
gtaacttacgcttgtgaagaatcgacaaaatattctgtgagtgaactactccaacctgaa
gctgctcttgatgttgcactactcacccaacaaagaattggagaaagaatggattga
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