Athalia rosae (coleseed sawfly): 105684282
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Entry
105684282 CDS
T09776
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9 isoform X1
KO
K18735
protein SMG9
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aroa03019
]
105684282
Messenger RNA biogenesis [BR:
aroa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105684282
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Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
MMR_HSR1
RsgA_GTPase
nSTAND3
ABC_tran
DUF6498
AAA_22
AAA_14
Motif
Other DBs
NCBI-GeneID:
105684282
NCBI-ProteinID:
XP_012252954
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Position
2
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AA seq
381 aa
AA seq
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MNSRKTHSTLKDLDSMDGDSRARIKVVDRPTFILKTREGESRAVSPSQRNGSKRDADYQS
TTFSKSLDTRPVLSTRLEMTNAIKFMDENMQLMENPLDYLYDQQDFVVVGCIGTRGVGKS
TILSMLTSNYVADVFATQTLSHHESGSNCTSGIDFYITKSRVIYLDTQPILSGAAVDHAG
LYEQKKNSNDFANTENNVELQSLQFTSFLLSVCHVIIFIQDWFVDPNLIRFIQTAEMLKP
SSASAIDQDFVEYYPHILFLHNKAELQDFMPDTVDMMSDFYNKVLTNSRLQTHSGLNMGS
SIVEGQLNLFIVPKITSEEDLVIHESEAKLIEKLRMRIHGVSRNPMTPAVLTEKNWYHYA
SKVIDAIKKSHLFSEYGRLMP
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgcgtaaaacgcattctactttgaaagatcttgactctatggatggagacagc
agagcacgaatcaaagtagtcgatcgtcctacattcattttaaaaactcgagaaggtgag
agccgtgcagtatctccgagtcaaagaaatggtagcaaaagagatgctgattaccaatct
actactttctcaaaatcattggatactcgtcctgtactctccacacgcctcgaaatgacc
aatgccattaagttcatggatgaaaatatgcaactcatggaaaaccctttagactatttg
tatgatcaacaagattttgtggttgtcggctgcatcggtaccagaggtgttgggaagtca
actatactgtcaatgctaacatctaattatgtggctgatgtctttgcgacgcaaacatta
tctcatcatgaaagtggatcaaattgtacatcagggatagatttttacatcaccaaaagc
agagtgatctatttggatactcaacctatactatctggggcagcagttgaccatgctgga
ttgtatgagcaaaaaaaaaattcgaatgattttgctaatacagaaaataatgtggaactg
cagtctttacaatttacatcgttcttactatctgtttgccatgttataatattcattcag
gattggtttgtagaccccaatttaatcagattcatacagactgccgaaatgctgaaacct
tcttcggcatcagccatagaccaagactttgttgaatactatccgcacatactcttttta
cacaataaggcagagttacaggacttcatgcctgatacagtagacatgatgagcgatttt
tataataaagtactcacaaattctagattgcaaacgcacagtggattgaatatgggttct
tccattgttgaaggccaactaaatttattcattgttccaaagatcactagtgaagaagat
ctggttattcacgagagtgaagccaagcttatagagaaattgcgcatgagaatacatggg
gtttctcgaaatccaatgactccagctgtactgacagagaaaaattggtaccactatgct
tcgaaggttatagatgcgataaaaaaaagtcatttgttttcggagtatggaagattgatg
ccatga
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