Athalia rosae (coleseed sawfly): 105684358
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Entry
105684358 CDS
T09776
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aroa03009
]
105684358
03012 Translation factors [BR:
aroa03012
]
105684358
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105684358
5.6.2.5 RNA 5'-3' helicase
105684358
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
Other ribosome biogenesis factors
105684358
Translation factors [BR:
aroa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105684358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
zf-AN1
Viral_helicase1
SMUBP-2_HCS1_1B
ResIII
Helicase_RecD
DEAD
AAA_22
AAA_24
UvrD_C_2
PIF1
nSTAND3
AAA_18
T2SSE
cobW
AAA_31
Flavi_DEAD
UvrD-helicase
AAA_25
AAA
YqeC
SLFN-g3_helicase
ABC_tran
AroM
CbiA
Motif
Other DBs
NCBI-GeneID:
105684358
NCBI-ProteinID:
XP_012253072
LinkDB
All DBs
Position
5:14662162..14666050
Genome browser
AA seq
915 aa
AA seq
DB search
MDETISSFVSTHLHLLQLEQEENLEHVFNNISSIALRNLQKQGEALSKLVVGSLGSRGLR
QQVDFVDHDNLPLKHGFVVGDLVICIQLNNRSRLLRGLVCAVGERTISVLTENVDEEEQY
ALIKADSDYTYNCQTRALITLKSKEIYTWPCFPIIQILFDNDEKVVKDLLHADIPIPEKF
LADDGDLTFINPKLAVDQRAAVNFALRRKYLAIIQGPPGTGKTTTLVELIGQLRGFGKKV
LVCAPTNVAVDNVAVKLCEASIKPLRMGHPARIAKEVQSCSMDANVRQDGAYEILMDIKK
SLNELREKMDCAKPWAKVKELNKEYKERMDKLTSEIIKRHSVIICTLNSASTGKFAKALR
HVPKDYFDVVVVDEASQALEASNWIAIPNAPKLVLAGDINQLPPAVMNQKAAKNGLSLSL
MERAIKKLGQDSFRSLEIQYRMNEKIMAWSSKQFYDNTLKADKLVQKHLLKDLPGVTSCA
MTNDSLLFVDTCGCECEEYQIGSETISKGNVGEAIVVDRIVSALVKAGVPESGIGVITPY
ALQVDFIKKTLSARSISAEVSTVDGFQGREKEIIILSLVRSNEEKTLGFVTDFRRLNVAV
TRARRLLVVIVNSETVEDNKLITSLLKHIEDNGVLETAQEYLGDDLEDLKKELEENVKVK
HKVTTSEREEIKAEKKKKPVSKNTVEMKEDKNLKSVLKDKGIDLSVNSNRKTYNVFDYIG
ENTSDFEDDYESILQELEITVDEASAAGPGKSAPPMEKEDSKPKIEISNLIASLKQLASP
SVENDPVVQPEPSSNAQKKKKKSKNPKPKEEELNDVDDFDKMIAAVTAKNRICAMSGCKR
STELIQFDCEFCKSRYCLKHGMQEIHGCGEAVRKKERKEFTHRKPEVCEKKDKEKFARKL
KQLEEARKPKKKVNK
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacgatatccagttttgtgagtactcatttacatctcctacagttggaacaa
gaggaaaatctagaacatgtcttcaacaacatctcttcaattgctctgcgtaacctgcaa
aaacaaggggaagccttgagtaaacttgttgtggggagccttggtagccgaggtctaaga
cagcaggtagactttgtcgaccatgataatcttccgctaaaacatggttttgtcgttggc
gacttagtcatctgcattcagttaaacaatcgcagtcgtctactgcgaggtttagtatgt
gctgttggagaaagaacaatatcagttttgacagagaatgttgatgaagaggaacagtat
gccctaatcaaggctgactctgattacacctataactgccagacaagagccctgataact
ttgaagtccaaagagatatatacatggccctgtttccccattattcaaatactttttgat
aatgacgagaaagttgtcaaagatctgttgcatgctgatattccaattcctgaaaaattt
ttggctgacgatggtgacttgacattcatcaatccaaaattggcagtcgatcaaagagca
gctgtaaattttgctctccgtagaaaataccttgctattattcaagggcctccgggtact
ggaaagaccacaacattggtcgaattaatcgggcaactacgcgggtttggtaagaaggtg
ttggtctgtgcaccaaccaacgtagcggtcgataatgtagccgttaagctttgcgaggct
agtattaaaccgctgagaatgggtcatccagctcgaatagccaaagaagtacagagctgc
tcaatggatgcaaatgtccgacaagatggagcgtacgaaattttaatggacataaaaaaa
tctcttaacgagctgcgagaaaaaatggattgtgctaaaccatgggccaaagttaaagag
ctgaataaagaatacaaagaaagaatggataaacttacttccgagataattaaaagacac
tctgttattatctgtacgttgaactctgcttcaaccggtaaatttgcaaaagctcttcgg
catgtgccgaaagattattttgacgttgttgtggtagatgaagcttctcaggctttagaa
gcttcgaactggatcgccataccaaatgcaccaaagcttgtactagccggagatatcaat
cagctaccaccagctgtaatgaatcaaaaggcagcaaaaaatgggctgagccttagtttg
atggagagagctattaaaaaattgggacaagattcatttaggagccttgaaattcaatac
agaatgaatgaaaagataatggcatggtctagcaaacagttttacgacaatactctcaaa
gctgacaaacttgttcagaaacacctgctcaaagatctgcctggggtgacctcctgtgcg
atgacaaatgattctcttttattcgttgatacttgtggatgtgaatgcgaagaatatcag
ataggtagcgaaacaatatcaaaaggtaatgttggagaagcgattgtagtagatcgcata
gtctcagcgctagtaaaggctggtgtacccgaatctgggatcggagttataacgccgtat
gccttgcaggtcgattttataaaaaaaactttatctgcacgatcaatatctgctgaagtt
agtacagtagatggattccagggtagagaaaaagaaattattatcctgtctctggtcaga
agtaatgaggaaaaaacactgggatttgtgaccgattttagacgactaaatgttgcagtt
acaagggcaagacgcctcttggttgtaatagtcaatagtgagacagtcgaagataacaaa
ttaattactagtttattgaagcacatcgaagataatggggtcctagaaacggcccaggag
tatttgggagatgatttggaagacttgaagaaggaactagaagaaaacgtcaaagtaaaa
cacaaagttactacatctgaaagagaggagattaaagcagaaaaaaagaaaaaaccggta
tcaaaaaatactgttgaaatgaaagaggataagaatctaaagagtgttctcaaagataaa
ggaatcgacttgagtgtaaattccaaccggaaaacttacaacgtttttgattatatcggt
gaaaatacgtccgacttcgaagatgactatgaatcaatattacaagaactagaaattaca
gttgacgaagcttcagctgccgggccgggtaaatccgcaccgccaatggagaaagaagat
tcgaaaccaaaaatcgaaatatccaatttgatcgctagtcttaaacaacttgcatcgcct
tcagttgaaaatgaccctgtagttcagcctgaaccatcgtccaatgcccagaaaaaaaag
aagaaatcgaagaatcccaagcctaaagaagaagaattgaacgatgtggatgactttgat
aaaatgatagctgctgttactgcaaaaaatcgcatctgtgccatgtcggggtgcaaaaga
tctaccgagttgattcagttcgattgcgaattttgcaaatctagatactgcctaaaacat
ggaatgcaggaaattcacggatgtggtgaggcggtgcgcaaaaaggagagaaaagaattt
acccatcggaaaccggaagtctgtgaaaaaaaggacaaggaaaaatttgccaggaaatta
aagcaactagaggaggctcgtaagcctaagaaaaaagttaacaaatag
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