Athalia rosae (coleseed sawfly): 105684369
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Entry
105684369 CDS
T09776
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105684369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aroa03009
]
105684369
Ribosome biogenesis [BR:
aroa03009
]
Eukaryotic type
Pre-60S particles
RNases
105684369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
105684369
NCBI-ProteinID:
XP_012253098
LinkDB
All DBs
Position
5:13095572..13100720
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AA seq
1168 aa
AA seq
DB search
MLPSTGYFKTINCPFYDSGLCERPYCHFKHPRRDEAAANSGLPIQAVALNQNEGIAAIDT
QNSSTFQELVSQAVKKVLATQDVTETAKISDNIVSRVVEELNPASSSAVRPVIPTPQATV
QPTPCVYNPTPIAELKKRHIPVVPYMPTRDSRIAVKRKTSPERFKPWLSVPQDITNSLDN
ALSGPSYSTGKVTEITYKPTAITNITDTTNVQGYIPTTKSDSSSSNSFEDGNSSDYIFKT
KEEYWPKSKKRREEYVPKKLKVPLKIVQQLDEPDADQAVAEMGTTGEVPNTNEHNTERLE
NKGLEEYELEVEPQFSDEDERDKICNNSTKKTNEAEVTNSEESRRSQKSSSRSNDVKDSS
RGNKTTDKTTSNVKDKEKSKEKSDKDKSSKKERSSSTSERNKDLKEVSNREKSKDKDKHR
SSSSSKEKSHSSSSNKDKSRRHAREKGKSRHSDNESSRRSKESSSKSSKHKDRSVRGKSK
DSHKSSSRDKHRSTSSSSSSKDKHSHKSDKSYRSSTKSSTLNKKSESRKTSGNETSSNED
HDEKENSPSIRYRPSSPFSEEILEISDSDHDIEEECLKIFQEYEVPDHPKETNVAERPKP
EPQETGETGRKRVAHPSADQFCEIKRVPAKPPKIPVNPHLRLTERWRLMKEAIATANAEK
TTAPTAVINASQSFSAESKKTSGGTKHTEQVVNGNGRLRIAHVPYATSLALAKQKVTQAM
NKAVENKTVAQTAKGGSRVAHVPQVIPQLIRPEPLNVVTQKFPLNVRQYYVNMMQDVCVQ
IYTNAEDAAQRAVREEFACHERCKAVAVYKNSCMLATHRLRKELDQRSGDSGTSSASGTV
SHESVLAGKSKGSWSVVKTKRSVMEFKGAILYTLLSKWILTEEQLRENGYPRPHPDGPTG
RVKVYVTNTRGQTILSKVPNERFCSRCNQPYMVDKHGYATAQQNCIYHWGRKFTVKGEGR
YSCCRQYGSAPGCCDAKTHVWDYVDYENLRGYVKTLPKDDLPVEEHGVYALDCEMSYTTQ
GLELTRVTVINEECNVVYETFVKPVHPVVDYNTRFSGITEQNMEGITTTLLDVQATLLSM
FSDKTILIGHSLESDFKALKLLHDSVVDTSIMFPHRNGPPQKRALRNLCSEYLRKIIQND
VGGHDSNEDAVSCMELVLWKLKEEAKSQ
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgttgccctcaacagggtactttaaaacaatcaactgcccattttatgacagtgggttg
tgcgaaaggccttattgtcacttcaaacatccgaggagagatgaagcggcagcaaattct
ggtctaccgattcaagctgtggcattaaaccaaaatgagggaattgccgccatagatact
cagaattctagtaccttccaagagttggtctcccaggcagtgaaaaaggttttagctacc
caggatgtgactgaaacggctaagatatcagacaacattgtatccagggtagttgaggag
ctcaatccagcctccagttctgcggttcgaccagtaattccaacacctcaggccacagtt
caaccaacaccttgtgtctataatcctacacctatagcagagttgaagaaaaggcacatt
cctgttgtcccttacatgcccaccagagatagtagaatagcagtgaaacgcaagacttct
ccagagagattcaaaccctggcttagtgttccgcaggatattaccaactccttagacaat
gctttgtccgggcctagctattcaactggcaaggttacggaaataacttacaaacctact
gcgataacaaacattacagacaccactaatgtgcaaggttatataccaaccacgaaatct
gattcctcatcttctaattctttcgaagatggaaactcaagcgattacattttcaagacg
aaagaggagtactggccaaagtccaaaaagcgcagagaggaatatgttccaaagaaactc
aaagtccccctaaagattgtacagcaattagacgagcctgatgcagatcaagcagtagct
gaaatggggaccacaggagaggttccaaatactaatgaacacaataccgaacgacttgaa
aacaagggcttagaggaatatgagctggaagtagaaccacaattttctgatgaggatgag
cgcgataaaatttgcaataattctactaaaaaaacgaacgaagcagaagtcacgaattcg
gaggagtctagaagaagtcagaagtcgagtagtagatcaaacgacgtaaaagatagtagc
cgtggcaataaaacaacggataaaacgacaagcaatgttaaggataaggaaaagtccaaa
gagaaatctgataaggataagagtagtaaaaaagaaaggagcagcagcacaagtgaacgg
aacaaggacttgaaggaagtgagtaatcgagagaagagcaaggataaggacaagcatagg
agtagttcaagttcaaaagaaaaatcccattcgtcatcttcgaataaggataagagtaga
agacacgcaagagaaaaagggaagagcaggcacagtgacaatgaaagctcaaggcggagc
aaagaatcctcttctaagtcaagcaaacataaggacaggagtgtgagaggaaaaagcaag
gatagtcacaaatctagcagtcgggataagcacagaagcacatcgagttcgtcatccagc
aaagataaacactcccacaagtcagacaagagttacagatcgagtacaaaatcgagcact
ttgaacaaaaaatccgaatctaggaaaacgagcggaaatgagactagcagcaacgaagac
cacgacgaaaaagagaatagcccatcgatcaggtacagaccctcttctccgttctccgaa
gagattctggagatctccgactctgaccacgatattgaagaagaatgcctcaagatattt
caggaatacgaagttcctgaccacccaaaagagaccaacgttgcagagcggcctaagccg
gagcctcaagaaaccggagaaacaggccgcaaaagagtagctcatccctcggcggatcaa
ttttgtgaaatcaaaagggtacctgctaaaccaccaaagataccagtgaatcctcatctt
cgattgaccgaaaggtggcgattaatgaaggaagcaatcgccactgctaatgccgagaaa
acaacagctcctaccgccgtgattaacgcttcgcaaagcttttcggcagagtcgaaaaaa
acttcaggaggaacaaaacataccgaacaagtcgtcaatggaaacggtcgtttgagaatc
gcgcacgtaccttatgcaacttctcttgcattggcgaagcaaaaggtaacgcaggcgatg
aataaagccgtggaaaacaaaactgtcgcacaaacggcaaaaggtggatctcgagttgca
cacgttccgcaagtgattccacagttgataagaccggaaccattgaatgtggtaacacag
aaattcccgctcaacgttcgccaatactacgtgaacatgatgcaagatgtttgtgttcaa
atatatacaaacgccgaagacgcggcgcagagggctgtgagggaggaattcgcttgtcac
gaacgttgtaaggcagtggctgtgtacaagaattcttgtatgttggccacgcacaggctt
cgaaaagagttggaccagcgatcaggtgacagcggtacctcttccgccagtggaacagtt
tcgcacgaatcagtgctcgctggaaaatccaaggggtcatggagcgttgtaaagacgaag
agatcggtgatggaattcaagggagcaatactctacacccttctctcgaaatggattctg
acggaagaacaactcagagaaaatggatatcctaggccgcaccccgacgggcctacgggg
cgcgtgaaagtctacgttacgaacacgcggggtcaaacgattctttccaaagtgcctaac
gagagattctgcagtcgctgcaatcagccttacatggttgacaagcacggatacgccacc
gcgcaacaaaactgtatttatcattggggcaggaagtttacggtgaaaggcgagggaagg
tacagctgctgtcgccagtacggatccgcgcctggatgctgcgacgcgaaaacgcatgtc
tgggactacgtggattacgaaaatcttcgcggttacgttaaaacactgccaaaagatgac
ctaccggtcgaagagcacggggtctatgccctggattgtgaaatgtcctacactacgcaa
ggtctcgaattgaccagggtgactgtgataaacgaagagtgcaacgtcgtttacgaaaca
ttcgtgaaacccgtccaccctgtggtagactacaacactagattctcagggattacagaa
caaaatatggaagggatcaccactaccttgctcgacgttcaggccactctcttatcaatg
ttctctgataagactatactcatcggtcacagtttggagagcgatttcaaggctcttaaa
ttgctccatgactcggtggttgacaccagtattatgtttcctcaccgaaacgggcccccg
caaaaaagagcgctccgaaatctttgctcggaatatctacggaagataattcagaacgac
gtcggtggtcacgacagtaacgaagacgctgtctcgtgcatggagttagtcctttggaaa
ttgaaggaagaagcaaagtcgcaataa
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