Athalia rosae (coleseed sawfly): 105684570
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Entry
105684570 CDS
T09776
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
aroa
Athalia rosae (coleseed sawfly)
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aroa03041
]
105684570
Enzymes [BR:
aroa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105684570
Spliceosome [BR:
aroa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105684570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
CMS1
KH_2
MOEP19
KH_KhpA-B
KH-I_KHDC4-BBP
HEM4
DUF2608
VitK2_biosynth
Motif
Other DBs
NCBI-GeneID:
105684570
NCBI-ProteinID:
XP_012253449
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All DBs
Position
2:complement(5310814..5315227)
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AA seq
704 aa
AA seq
DB search
MADLDEWNSDEDTSNNYQEIQTQNYVRGGRGSRSGYGDRGQSDHRSANGNWRSNGESQRG
RGNGGRDRGQRSERNNRNDSSSNGLEILIDSSKVGKLIGRGGCKIKELQEQSGARINVGK
PEDSMSTTVTLVGSEEAQQKAKELIDELLTEKPPPPPPQQKENVDAEPEMDFTNFDWTKA
NEEYAKCQLERWAKCPKLIKNFYHEDPVVANMPKDQVAQFRKKNNDIMVCIFEEAAENDE
KFSNPEIPNPVQTFDQAFKDYPEIMEEILKQGFATPSPIQCQAWPILLSGKDLIGIAQTG
TGKTLAFLLPALIHIEGQPIPRSERGGPNVLVMAPTRELALQIEQEVAKYSYRGIKAVCL
YGGGSRKEQVDIVSRGVEIVIATPGRLNDLVQAGIVDVTTITYLVLDEADRMLDMGFEPQ
IRKTLLDIRPDRQTVMTSATWPPGVRRLAQSYMKDPLQVYVGSLDLAAVHSVMQTILVVD
DSEKNEMLFEFFNNMGPDDKVIVFVGKKSRVDDLASDLALKGISCQSIHGGREQCDREQA
LEDIKSGEVRILIATDVASRGIDIEDITHVYNYDFPRDIEEYVHRVGRTGRAGRSGESIS
LMTRSDWSHAKELIRILEEANQAVPEEVHRMAERYSAWKQRKVQDKERERLDAGGGGGGY
RGGDRDGGGRRYGGGGGSSYGGSGYGGSYGGGGGRRGRGRSGGW
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcttgacgaatggaatagcgacgaagacacttcgaataattatcaagaaata
cagactcagaattatgttcgtggtggtcgtggatccaggtcaggatatggtgaccgagga
cagtctgatcacagatctgctaatggaaattggagaagtaatggtgaatctcaaagagga
agaggaaacggagggagggatcgtggccagcgttcggagaggaataatagaaacgactcc
tcgtctaatgggctggaaatattaatagattcaagcaaggttggcaagcttatcggcaga
ggaggctgcaaaattaaagagttgcaggagcaaagtggtgctagaattaacgttggtaag
cccgaagatagtatgagtacgacggtaactttggttggttctgaagaagcgcagcaaaag
gccaaggaattgatcgatgaactattaacagaaaaaccgccaccgccaccaccacaacag
aaagaaaatgttgatgctgaaccagaaatggactttacaaactttgactggactaaagcc
aatgaggaatatgcgaaatgtcagctggaaagatgggcaaaatgtcccaagcttatcaag
aacttttaccatgaagatccagttgtggctaacatgccaaaagatcaagtagctcagttc
agaaagaaaaacaacgacattatggtttgcatttttgaagaggcagcagaaaatgatgaa
aaattcagtaatccagagataccaaatcctgttcaaactttcgatcaagcattcaaggac
taccctgaaattatggaagaaatcctaaagcagggatttgctactcccagtcccattcag
tgccaagcctggcccatcctcctttccggcaaggacctcattgggatagcacagactgga
acaggaaaaaccctggcatttctcttgcctgctttaatacatatagaaggtcaacccatt
ccgcgatctgagcgcggtggaccaaacgtactcgttatggcaccaacaagagagttggct
cttcagattgaacaggaagttgcaaagtactcttatcgcggaatcaaagcggtgtgcttg
tacggaggtggtagccgcaaagaacaagtcgacatagtttcccgcggagttgagatagta
attgctacgcctggaaggttgaacgaccttgtccaagccggtattgtggatgtcacaact
atcacttatcttgtccttgatgaggcagatcgcatgctggatatgggtttcgaaccacaa
atcagaaaaactctattagatatcaggcctgatcgccaaactgttatgacgagtgcaact
tggccacctggggttcggcgcttggcacaatcgtacatgaaagaccctctacaagtttac
gtaggctccttagatttggctgctgtacattccgtaatgcagacaattctcgttgtagat
gactctgaaaaaaacgaaatgttatttgagttcttcaacaacatgggtcccgacgacaaa
gttatagtgtttgttggcaaaaagtcacgagtggatgatttggccagtgacttggcgcta
aagggcatcagctgtcaaagtattcatggtggacgggagcagtgcgatagagaacaagca
ctcgaagacataaaatcaggtgaagttcggattctcatcgccacagacgttgccagcaga
ggaatagacatcgaagatattacgcacgtgtataactacgattttccgcgggatattgaa
gaatacgtgcatagagtcggccgaacgggacgtgctggtcgatcaggagagagtatcagt
ttaatgactagaagtgactggtcccatgccaaagagctaatccggatactcgaagaagct
aatcaggccgtgcccgaagaagtgcatcgaatggctgagcgatactccgcatggaagcaa
agaaaggtgcaggataaagaacgagaacgcctagacgcaggtggtggtggcggcggttat
cgtggtggagacagagatgggggcggtcgtagatatggcggcggcggtggcagtagctac
ggtggaagcggctatggtggaagctatggaggtggcggtggccgacgtggcagaggtcgc
tcaggtggttggtag
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