Athalia rosae (coleseed sawfly): 105684705
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Entry
105684705 CDS
T09776
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
aroa
Athalia rosae (coleseed sawfly)
Pathway
aroa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aroa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105684705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aroa03036
]
105684705
Chromosome and associated proteins [BR:
aroa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
105684705
REST complex
105684705
Heterochromatin formation proteins
Other heterochromatin formation proteins
105684705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
105684705
NCBI-ProteinID:
XP_012253694
LinkDB
All DBs
Position
7:complement(1280458..1307241)
Genome browser
AA seq
1498 aa
AA seq
DB search
MKRARGVDEVASAAAAAALKHSSGGGGGGGSIGAGGGVGVGGGIDYRPTTGLGVAVGPGQ
PIRPITTKEMPGSVQFGAVQAQQQYTGAIVMPTAAPSTVKVHSGSTTPPTPTAPGSSLSG
GAGSQQFQRLKVEDALSYLDQVKYKFNNQPQVYNDFLDIMKEFKSQSIDTPGVITRVSNL
FKGHPELIVGFNTFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSHHCTVNVGSP
PIASPPTQPAKAPPVLQIMQGSGSIHHSLGNNISTNSLTVHAPTSPPVQSYNNSHISAAQ
AQAAQALSQAQDGTPNSGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQ
KEQRNLKESGHLGTGGGTAVGGSGKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQ
QSPLSAMFQSNKGGAVNDHSAIVKKPLGLKALYNNSGNIPREHRETGNLGGLERDNRDHR
ERDRERPGARDLNSGQKFGHSAGQLKRSPSFSTSGSTGNSHHSQHGQPPSKKHKMATLRD
VTFADAGKYGSLNDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKTELVQLVTPFLG
RFPELLRWFKDFLGHSSDSSTSTSVTTCGLNIETLPNNVVRSHQERPQGDLAMEIDYSTC
KRLGASYCALPKSYMQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYR
CEDERFELDGVIETNAATIRVLEGVHKKMNRMSSEEIQKFRLDECLGGCSPTIHQRALRR
IYGDKAGDIIDGLKKNPVVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDH
QGINFKQNDVKALRSKSLFNEIETLYDERHEQADDGTGEGQAGGGGPHLVLAYKDKSVLD
DAANLLIHHVKRQTAIHKEDKQQIKSLLKHFIPDLFFHPRQELSDDERDDDDDKEDLDLP
ASSTSQITPSTITSGGLHGSRNKAASSPNLPLIPVKTEPDLKPPSHALSVDPEEAYTLFM
GSNNWYLFLRLHQILCERLTKMYEKAVALADEESRYKQQRKESTAVALRLKPKSEIEIED
YYPAFLDMVKNVLDGNMESTAYEDALREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDPTC
QQCMELFQREQRQPKDSSGAGGLCATAYLRLGSEIAYQRKAERVMTDENCFKIHIYKKDC
KITMELLDTESDDTTEGGCRDRESERERQREGISATEKWSTYVERYSAPLGQTSPKDIPT
SVDDTPTNHLVSSDQAGRGGRGRKRKNADINKKMEGSSWRSFDRLLAGRKPVFLCRNVRQ
WRKRVSRMARSPSANASHPDKPPESTAAGVKTLHATPGLLERPPPLRMTDAGDSGDIINT
DETQCRFNPNSYKMLYVASKEAFLYKPNSFTRARVCHPAVTKRLNSKFHQWLSSWATQNV
ANTQHRLCQDWLMGRYENLIPHRTRVVTDNDQSRSPYRQYNRYRIERLKSETSTELCA
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagctcgtggggtggacgaggtagcatcggcagcagcagcagcagcattaaaa
cattcgtcgggaggcggaggaggaggaggtagcattggagctgggggtggcgtaggagtt
ggggggggcatagactaccgtcctaccactggtttgggagtcgcagttgggcctggtcag
cctataagacctataactaccaaggagatgccaggaagcgttcagtttggcgccgttcag
gcgcaacaacaatatacaggagccatagtaatgcctaccgctgctccttctactgtcaag
gtgcattcgggtagtacaacgccaccgacaccaacggctccaggaagcagcttgagcggg
ggagctggatcgcagcagtttcaaaggctaaaagttgaagatgccttatcttaccttgac
caagtcaagtacaagttcaataatcaaccgcaggtatacaatgattttttggacatcatg
aaggagttcaagtcccagagtatcgatacaccaggtgttataacaagggttagcaacctc
tttaagggacatccagaactcatagtcggtttcaatacctttttacctccgggttacaag
atagaagtgcaagcgaatgagcaggggtatgcttttcaagtgtccgttagtatgccgagt
ccaactgctacgcatactgcaactctgtctcatcattgcacggtaaacgtgggttctcca
cctattgccagtccacctactcaaccggccaaggccccacctgtcttacaaataatgcag
ggatctggcagcatacaccattcacttggaaataatatttcaaccaatagcttgacggtt
catgctccaacttcaccaccagtccaatcgtacaataattcgcacattagcgcagcgcag
gcccaggccgctcaggcattgagtcaggcccaagatgggacgccgaacagtggccaaacg
cagcagagtcaacctgttgaattcaatcatgccattaattacgtgaacaagataaagaac
cgatttcaaggtcagcccgacaaatacaaaagattcctagaaattttacatacgtatcag
aaggagcagcgcaacttgaaagaatccggccaccttggaaccggtggtggcacagctgtt
ggaggaagtggaaagcatctaacagaggcggaagtctacagtcaagttgctaaattgttc
gagaatcaagaggatctcctcgcagagtttggacagtttcttcccgacgcaactaatcaa
caaagtcccctgtctgctatgttccagagtaacaaaggtggagcggttaacgatcattct
gcgatcgttaaaaaaccgctaggcttgaaggcgctttataataattctggaaacataccg
agagagcacagggagacgggaaacttgggtggattagaaagggataatcgagatcatcga
gagagggatagagagagaccgggtgctagagatttgaacagtggtcaaaagtttggtcac
agcgctggccagctaaaaagaagtccgtccttttccacttccgggtcaacagggaactct
caccattcacaacacggacagcctccgtctaaaaagcacaaaatggcgacgctcagagat
gtgacttttgccgatgccggcaaatatgggagtctgaacgactatgcctttttcgataaa
gtgcgcaaggctctgagatcgcaagaagtctatgaaaatttcttacgctgtttggttctg
ttcaaccaagagattgtctcaaaaacagaactagtacaactggtaacacctttcctgggc
aggttcccagagctcttacgatggttcaaagactttttgggacactcttcggattcttcc
acttctacatcggttacaacgtgcggcttgaacatagaaacactacccaacaacgttgtg
agaagtcaccaagaacgaccgcaaggagatttggcaatggaaatcgactactcaacttgc
aaacgactcggagcgtcttactgcgcattacccaagtcttacatgcaaccaaaatgcacc
ggaagaacgcagctatgtaaagaggtgctcaacgacacctgggtctcttttcctacgtgg
tccgaagacagtaccttcgttacttccagaaaaactcagtacgaagagtttatttaccgc
tgcgaggatgaacggttcgagctggacggtgttatagaaactaacgcggcaacaattcga
gttctcgaaggggtgcacaaaaaaatgaatagaatgagctcagaagagattcaaaagttc
agattagacgagtgtctcgggggatgttcgccgacgatacaccagcgagcgcttagaagg
atatacggagacaaggctggagatattatcgacgggttgaaaaagaaccccgtcgtcgcg
gtgcctgttgtcctcaggaggcttaagagcaaggaggaagagtggagggaagcacaaaaa
ggatttaacaaaatctggagagaacaaaacgaaaagtactatttgaaatccctggaccac
cagggtatcaattttaaacaaaatgacgtaaaagctctccgctcgaaaagtttgttcaat
gaaattgaaacgctgtacgatgagaggcacgagcaagcagatgacgggactggggagggc
caagcgggtggcggtggtccgcatttagtattagcatacaaagacaagtctgtgctagac
gatgccgcaaatcttttgattcatcacgttaaaagacagaccgctattcacaaggaggac
aaacagcagatcaagtcacttctgaagcatttcatccctgacctatttttccatcctaga
caagaactaagtgacgacgagcgggacgatgatgatgacaaagaggatttagacttacca
gcgagtagcaccagccaaataacaccatcaacgattacttctggcggccttcatggaagc
agaaacaaagctgcttcgtcccctaatctacccttaatacctgtaaaaactgaaccggac
cttaagcccccttcccatgccttgtccgtcgacccggaagaagcatatacgctcttcatg
ggcagcaacaactggtatctgtttttgaggttacatcaaatactgtgcgagaggttaacg
aagatgtatgaaaaagccgtcgccttggcggatgaggagtccagatacaaacaacaacgg
aaggagagcacagctgttgcgttgagattaaaaccaaaaagcgaaatagagatagaggat
tattaccccgcctttctggatatggtgaaaaatgttctcgacggcaacatggaaagcacc
gcatacgaagatgcacttcgcgagatgtttgggattcacgcctatatcgcttttactctg
gacaaagtggtcacgtacgctgtgagacaattgcagcatctggtgtctgatccaacttgc
cagcagtgcatggaattgtttcaacgagagcagagacagccaaaggacagtagcggagct
ggaggcttgtgtgctacggcgtatctaaggctagggtcagaaattgcctaccagcgtaaa
gcagagagagttatgactgatgagaactgtttcaaaatacatatttataaaaaagactgc
aaaataaccatggagctgctggatacagaaagtgacgataccacagagggtggatgcagg
gatagagagagcgagagagagcgacagagagagggtataagcgcgacggaaaaatggtct
acgtatgttgagaggtactctgctcctcttggccagactagtccgaaggatattccaacc
tccgtagatgacacgccaaccaatcatcttgtgagtagcgaccaggcaggaagggggggc
aggggcagaaagcgcaagaacgctgatattaacaagaagatggaaggaagcagttggcgc
tcatttgacagactgttggcaggccgtaagccagtatttttatgccgcaatgtcaggcag
tggcgaaaacgagtatctaggatggccaggtcgccctcggcaaatgcctctcatccggac
aaaccaccagagtcaacggcagctggcgttaaaacactccacgctacacctgggctctta
gagaggcccccgcccctcagaatgacagacgcaggagatagtggcgatataatcaacacc
gatgaaactcagtgtcgattcaatccgaacagttacaagatgctctacgtcgccagcaaa
gaagctttcctctataaaccgaattctttcaccagagcaagagtgtgtcatccagcggta
acgaagcggttgaactcaaagttccatcagtggctctcgagttgggcgacgcagaacgta
gcgaatacgcagcatcgtttgtgtcaagactggttaatgggtcgttatgagaatttaatt
ccacacaggacacgtgtagtgaccgacaacgatcaatctcgttctccttatcggcagtac
aatcgatatcggatagaacgtttaaagtctgagacttcgaccgaactgtgtgcatag
DBGET
integrated database retrieval system
